RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 MYCNOSP40205 109 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 ZFAND3Q9H8U3 227 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 TAX1BP3O14907 124 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 MUSTN1Q8IVN3 82 aa14.67□□□□□ -0.06
CDK13-202ENST00000340829 NTN5Q8WTR8 489 aaPredicted RBP14.67□□□□□ -0.06
CDK13-202ENST00000340829 A4D1N5 150 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 ABCA2Q9BZC7 2435 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 ESM1Q9NQ30 184 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 SMAD5-AS1Q9Y6J3 95 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 GAGE12HA6NDE8 117 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 C20orf173Q96LM9 149 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 TIMM17AQ99595 171 aa14.66□□□□□ -0.06
CDK13-202ENST00000340829 OPRPNQ99935 248 aaPredicted RBP14.66□□□□□ -0.06
CDK13-202ENST00000340829 SOCS3O14543 225 aa14.65□□□□□ -0.06
CDK13-202ENST00000340829 SH2D6Q7Z4S9 175 aa14.65□□□□□ -0.06
CDK13-202ENST00000340829 PIFOQ8TCI5 191 aa14.65□□□□□ -0.06
CDK13-202ENST00000340829 CDSNQ15517 529 aa14.65□□□□□ -0.06
CDK13-202ENST00000340829 E9PLD3 99 aa14.64□□□□□ -0.07
CDK13-202ENST00000340829 HIGD1BQ9P298 99 aa14.64□□□□□ -0.07
CDK13-202ENST00000340829 DAZ2Q13117 558 aaKnown RBP14.64□□□□□ -0.07
CDK13-202ENST00000340829 C9orf66Q5T8R8 295 aa14.64□□□□□ -0.07
CDK13-202ENST00000340829 DAZ4Q86SG3 579 aaKnown RBP14.64□□□□□ -0.07
CDK13-202ENST00000340829 DAZ3Q9NR90 486 aaKnown RBP14.64□□□□□ -0.07
CDK13-202ENST00000340829 TRBV7-3A0A075B6L6 115 aa14.64□□□□□ -0.07
CDK13-202ENST00000340829 ATP6V0E2Q8NHE4 81 aa14.64□□□□□ -0.07
CDK13-202ENST00000340829 PRSS47A8MTI9 375 aa14.63□□□□□ -0.07
CDK13-202ENST00000340829 DAND5Q8N907 189 aa14.63□□□□□ -0.07
CDK13-202ENST00000340829 TP73-AS1Q9UF72 201 aa14.63□□□□□ -0.07
CDK13-202ENST00000340829 SPATA12Q7Z6I5 190 aa14.63□□□□□ -0.07
CDK13-202ENST00000340829 IGLV10-54A0A075B6I4 117 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 DSCAML1Q8TD84 2053 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 MAP6D1Q9H9H5 199 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 DNAJC9-AS1A6NH13 148 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 TRAV25A0A0B4J276 109 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 TEX48A0A1B0GUV7 120 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 IGLV2-11P01706 119 aa14.62□□□□□ -0.07
CDK13-202ENST00000340829 F8WEM9 126 aa14.61□□□□□ -0.07
CDK13-202ENST00000340829 C10orf99Q6UWK7 81 aa14.61□□□□□ -0.07
CDK13-202ENST00000340829 NKAPP1Q8N9T2 125 aa14.61□□□□□ -0.07
CDK13-202ENST00000340829 C20orf203Q8NBC4 194 aa14.61□□□□□ -0.07
CDK13-202ENST00000340829 HERV-K104P63124 156 aa14.6□□□□□ -0.07
CDK13-202ENST00000340829 CEMP1Q6PRD7 247 aaPredicted RBP14.6□□□□□ -0.07
CDK13-202ENST00000340829 CEP350Q5VT06 3117 aa14.6□□□□□ -0.07
CDK13-202ENST00000340829 P0DMU3 169 aa14.6□□□□□ -0.07
CDK13-202ENST00000340829 FAM231AP0DMU4 169 aa14.6□□□□□ -0.07
CDK13-202ENST00000340829 FAM231CP0DMU5 169 aa14.6□□□□□ -0.07
CDK13-202ENST00000340829 IGHV4-31P0DP07 118 aa14.59□□□□□ -0.07
CDK13-202ENST00000340829 CRLF1O75462 422 aa14.59□□□□□ -0.07
CDK13-202ENST00000340829 EDA2RQ9HAV5 297 aa14.59□□□□□ -0.07
CDK13-202ENST00000340829 Q8N6K4 173 aa14.59□□□□□ -0.07
CDK13-202ENST00000340829 K7EQG2 157 aa14.58□□□□□ -0.08
CDK13-202ENST00000340829 DEFB4AO15263 64 aa14.58□□□□□ -0.08
CDK13-202ENST00000340829 Q6YL49 198 aa14.58□□□□□ -0.08
CDK13-202ENST00000340829 IFITM1P13164 125 aa14.58□□□□□ -0.08
CDK13-202ENST00000340829 TRAV4A0A0B4J268 109 aa14.57□□□□□ -0.08
CDK13-202ENST00000340829 ATP5G1P05496 136 aa14.57□□□□□ -0.08
CDK13-202ENST00000340829 MRAPQ8TCY5 172 aa14.57□□□□□ -0.08
CDK13-202ENST00000340829 TINCRA0A1B0GVN0 87 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 HHLA3Q9XRX5 114 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 ANKRD11Q6UB99 2663 aaPredicted RBP14.56□□□□□ -0.08
CDK13-202ENST00000340829 IGKV2D-24A0A075B6R9 120 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 WFDC2Q14508 124 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 DEFB135Q30KP9 77 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 ZFAND2AQ8N6M9 145 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 WFDC11Q8NEX6 87 aa14.56□□□□□ -0.08
CDK13-202ENST00000340829 RNASE8Q8TDE3 154 aaKnown RBP14.56□□□□□ -0.08
CDK13-202ENST00000340829 CLPSL1A2RUU4 121 aa14.55□□□□□ -0.08
CDK13-202ENST00000340829 SPART-AS1P0CW21 52 aa14.55□□□□□ -0.08
CDK13-202ENST00000340829 VSIG2Q96IQ7 327 aa14.55□□□□□ -0.08
CDK13-202ENST00000340829 CDK2AP2O75956 126 aa14.55□□□□□ -0.08
CDK13-202ENST00000340829 SND1-IT1Q9HBX3 110 aa14.55□□□□□ -0.08
CDK13-202ENST00000340829 Q9HAA7 133 aa14.54□□□□□ -0.08
CDK13-202ENST00000340829 COX7B2Q8TF08 81 aa14.54□□□□□ -0.08
CDK13-202ENST00000340829 BAALC-AS2P0C853 105 aa14.54□□□□□ -0.08
CDK13-202ENST00000340829 MRPL23Q16540 153 aaKnown RBP14.54□□□□□ -0.08
CDK13-202ENST00000340829 CPAMD8Q8IZJ3 1885 aa14.54□□□□□ -0.08
CDK13-202ENST00000340829 TMEM263Q8WUH6 116 aaKnown RBP14.54□□□□□ -0.08
CDK13-202ENST00000340829 ICOSQ9Y6W8 199 aa14.54□□□□□ -0.08
CDK13-202ENST00000340829 RNF185Q96GF1 192 aa14.53□□□□□ -0.08
CDK13-202ENST00000340829 EML5Q05BV3 1969 aa14.52□□□□□ -0.08
CDK13-202ENST00000340829 LGALS9O00182 355 aa14.52□□□□□ -0.08
CDK13-202ENST00000340829 ANKRD29Q8N6D5 301 aa14.52□□□□□ -0.08
CDK13-202ENST00000340829 HIST2H2BDQ6DRA6 164 aa14.52□□□□□ -0.08
CDK13-202ENST00000340829 Q6ZUT4 128 aa14.52□□□□□ -0.08
CDK13-202ENST00000340829 HIST2H2BCQ6DN03 193 aa14.52□□□□□ -0.09
CDK13-202ENST00000340829 IGHV3-30P01768 117 aa14.52□□□□□ -0.09
CDK13-202ENST00000340829 IGHV3-33P01772 117 aa14.52□□□□□ -0.09
CDK13-202ENST00000340829 IGHV3-30-3P0DP02 117 aa14.52□□□□□ -0.09
CDK13-202ENST00000340829 IGHV3-30-5P0DP03 117 aa14.52□□□□□ -0.09
CDK13-202ENST00000340829 COL5A1P20908 1838 aaPredicted RBP14.52□□□□□ -0.09
CDK13-202ENST00000340829 HAMPP81172 84 aa14.51□□□□□ -0.09
CDK13-202ENST00000340829 ODF3Q96PU9 254 aa14.51□□□□□ -0.09
CDK13-202ENST00000340829 UBL5Q9BZL1 73 aa14.51□□□□□ -0.09
CDK13-202ENST00000340829 COX7A2LO14548 114 aa14.51□□□□□ -0.09
CDK13-202ENST00000340829 Q6ZTI0 123 aa14.51□□□□□ -0.09
CDK13-202ENST00000340829 C15orf53Q8NAA6 179 aa14.51□□□□□ -0.09
CDK13-202ENST00000340829 IGHV1-58A0A0C4DH39 117 aa14.5□□□□□ -0.09
CDK13-202ENST00000340829 Q6ZS46 218 aa14.5□□□□□ -0.09
CDK13-202ENST00000340829 LRRC75A-AS1Q8N1F1 130 aa14.5□□□□□ -0.09
CDK13-202ENST00000340829 DEFB114Q30KQ6 69 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms