RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TANC1Q9C0D5 1861 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 XIRP2A4UGR9 3374 aa1.75□□□□□ -2.13
HMGB1P47-201ENST00000511281 LOC285095A0A1B0GVY8 99 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 HMGA1P17096 107 aaKnown RBP1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 DNAJB13P59910 316 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 CIRBPQ14011 172 aaKnown RBP1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 VMA21Q3ZAQ7 101 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 FAM19A2Q8N3H0 131 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 OR4C12Q96R67 309 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 PRUNE2Q8WUY3 3088 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 MUC3AQ02505 3323 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 COL4A6Q14031 1691 aa1.74□□□□□ -2.13
HMGB1P47-201ENST00000511281 DNAH12Q6ZR08 3092 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 TRAV36DV7A0A075B6V5 113 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 C5orf67F2Z3F1 127 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 CCL22O00626 93 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 SMIM24O75264 130 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 PIRTP0C851 137 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 GTF2A1P52655 376 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 TEN1Q86WV5 123 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 JPT1Q9UK76 154 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 MYO18AQ92614 2054 aaKnown RBP1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 SIP14410 1827 aa1.73□□□□□ -2.13
HMGB1P47-201ENST00000511281 CXorf51AA0A1B0GTR3 108 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 C9orf170A2RU37 121 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 F8W1H4 67 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 DEGS1O15121 323 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 IGHV3-33P01772 117 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 SAA1P0DJI8 122 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 COX4I1P13073 169 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 LINC00322Q6ZN03 302 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 FOXI2Q6ZQN5 318 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 DEFB107AQ8IZN7 70 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 BORCS5Q969J3 196 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 CST11Q9H112 138 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 REV3LO60673 3130 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 LAMA2P24043 3122 aaKnown RBP1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 ATG2AQ2TAZ0 1938 aa1.72□□□□□ -2.13
HMGB1P47-201ENST00000511281 BORCS7-ASMTA0A0B4J1R7 106 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 LOC105371267A0A1B0GV96 52 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 BBIP1A8MTZ0 92 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 LOC730098B7Z3J9 87 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 FXYD1O00168 92 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 SCTP09683 121 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 TPT1P13693 172 aaKnown RBP1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 ZNF25P17030 456 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 FOXA3P55318 350 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 OR8B8Q15620 311 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 Q5XG85 94 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 IZUMO2Q6UXV1 221 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 RPS27LQ71UM5 84 aaKnown RBP1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 TET1Q8NFU7 2136 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 OR5A2Q8NGI9 324 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 TCEAL4Q96EI5 215 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 ODF3Q96PU9 254 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 NIT2Q9NQR4 276 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 BATF3Q9NR55 127 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 DNAJC15Q9Y5T4 150 aa1.71□□□□□ -2.14
HMGB1P47-201ENST00000511281 IGLV3-32A0A0A0MS00 114 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 TCRBV3S1A0A5B6 114 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 TRACP01848 142 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 LINC00032P0C843 101 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 MPC1LP0DKB6 136 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 CCL4P13236 92 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 SPINT3P49223 89 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 POLR2JP52435 117 aaKnown RBP1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 KRTAP10-4P60372 401 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 SPRNQ5BIV9 151 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 SCIMPQ6UWF3 145 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 TEX29Q8N6K0 151 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 OR8J3Q8NGG0 315 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 PPP3R2Q96LZ3 170 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 AIF1LQ9BQI0 150 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 Q9H521 79 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 CCDC167Q9P0B6 97 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 TMEM14CQ9P0S9 112 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 CHD7Q9P2D1 2997 aa1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 NCOA6Q14686 2063 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P47-201ENST00000511281 CHD9Q3L8U1 2897 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 H3BRM9 83 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 CRYGSP22914 178 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 RPL38P63173 70 aaKnown RBP1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 EMX2Q04743 252 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 GKN2Q86XP6 184 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 CGREF1Q99674 301 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 AP4S1Q9Y587 144 aa1.69□□□□□ -2.14
HMGB1P47-201ENST00000511281 MYH6P13533 1939 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 USP34Q70CQ2 3546 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 A0A096LPI6 279 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 SMIM31A0A1B0GVY4 71 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 TPST1O60507 370 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 S100A3P33764 101 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 DIAPH2-AS1Q14236 149 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 C6orf52Q5T4I8 152 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 HAGHLQ6PII5 290 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 OR8I2Q8N0Y5 310 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 CLEC2BQ92478 149 aa1.68□□□□□ -2.14
HMGB1P47-201ENST00000511281 DPY30Q9C005 99 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms