RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SLC25A20O43772 301 aa12.71□□□□□ -0.37
TCOF1-206ENST00000445265 Q5PR19 223 aa12.71□□□□□ -0.37
TCOF1-206ENST00000445265 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.37
TCOF1-206ENST00000445265 SMAD5-AS1Q9Y6J3 95 aa12.71□□□□□ -0.37
TCOF1-206ENST00000445265 LINC01548A6NM66 108 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 CFC1BP0CG36 223 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 CFC1P0CG37 223 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 AZU1P20160 251 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 H3BMM0 161 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 MALP21145 153 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 UBE2WQ96B02 151 aa12.71□□□□□ -0.38
TCOF1-206ENST00000445265 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
TCOF1-206ENST00000445265 GATD1Q8NB37 220 aa12.7□□□□□ -0.38
TCOF1-206ENST00000445265 ZNF625Q96I27 306 aaPredicted RBP12.7□□□□□ -0.38
TCOF1-206ENST00000445265 IGHV3-38A0A0C4DH36 116 aa12.7□□□□□ -0.38
TCOF1-206ENST00000445265 DEFB1P60022 68 aa12.7□□□□□ -0.38
TCOF1-206ENST00000445265 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
TCOF1-206ENST00000445265 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 PAX4O43316 350 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 TRBV12-3P01733 135 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 SH2D6Q7Z4S9 175 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 Q8N6K4 173 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 GAGE4Q13068 117 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 GAGE5Q13069 117 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 SPANXA1Q9NS26 97 aa12.69□□□□□ -0.38
TCOF1-206ENST00000445265 C11orf71Q6IPW1 123 aa12.68□□□□□ -0.38
TCOF1-206ENST00000445265 RNF185Q96GF1 192 aa12.68□□□□□ -0.38
TCOF1-206ENST00000445265 TMEM89A2RUT3 159 aa12.68□□□□□ -0.38
TCOF1-206ENST00000445265 RPL39P62891 51 aaKnown RBP12.68□□□□□ -0.38
TCOF1-206ENST00000445265 A6NDX4 124 aa12.68□□□□□ -0.38
TCOF1-206ENST00000445265 HERVK_113P63121 156 aa12.68□□□□□ -0.38
TCOF1-206ENST00000445265 Q8N1Y9 231 aa12.68□□□□□ -0.38
TCOF1-206ENST00000445265 WFDC2Q14508 124 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 C6orf226Q5I0X4 101 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 URB1-AS1Q96HZ7 61 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 IGF2RP11717 2491 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 C11orf86A6NJI1 115 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 IGF1P05019 195 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 A0A0J9YXV3 536 aa12.67□□□□□ -0.38
TCOF1-206ENST00000445265 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
TCOF1-206ENST00000445265 TMEM243Q9BU79 118 aa12.66□□□□□ -0.38
TCOF1-206ENST00000445265 PRSS47A8MTI9 375 aa12.65□□□□□ -0.38
TCOF1-206ENST00000445265 HTN3P15516 51 aa12.65□□□□□ -0.38
TCOF1-206ENST00000445265 RNASE13Q5GAN3 156 aaKnown RBP12.65□□□□□ -0.38
TCOF1-206ENST00000445265 G3V4G9 280 aa12.65□□□□□ -0.38
TCOF1-206ENST00000445265 TM2D2Q9BX73 214 aa12.65□□□□□ -0.38
TCOF1-206ENST00000445265 C2orf91Q6ZV80 131 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 A4D1N5 150 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 DNAJC30Q96LL9 226 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 Q96MF0 132 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 A0A0J9YX75 114 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 GHRHP01286 108 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 ARHGAP32A7KAX9 2087 aa12.64□□□□□ -0.39
TCOF1-206ENST00000445265 MRPS12O15235 138 aaKnown RBP12.63□□□□□ -0.39
TCOF1-206ENST00000445265 ATRXP46100 2492 aa12.63□□□□□ -0.39
TCOF1-206ENST00000445265 PIFOQ8TCI5 191 aa12.63□□□□□ -0.39
TCOF1-206ENST00000445265 U3KQE9 123 aa12.63□□□□□ -0.39
TCOF1-206ENST00000445265 IGKV2D-26A0A0A0MRZ7 120 aa12.62□□□□□ -0.39
TCOF1-206ENST00000445265 CNFNQ9BYD5 112 aa12.62□□□□□ -0.39
TCOF1-206ENST00000445265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-206ENST00000445265 IGKV2-29A2NJV5 120 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-206ENST00000445265 ZFAND2AQ8N6M9 145 aa12.62□□□□□ -0.39
TCOF1-206ENST00000445265 NTN5Q8WTR8 489 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-206ENST00000445265 SPAG8Q99932 426 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-206ENST00000445265 SS18Q15532 418 aa12.62□□□□□ -0.39
TCOF1-206ENST00000445265 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
TCOF1-206ENST00000445265 JPT2Q9H910 190 aa12.62□□□□□ -0.39
TCOF1-206ENST00000445265 IGHV4OR15-8A0A075B7B6 117 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 A0A087WW49 117 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 IFITM1P13164 125 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 DEFB130BP0DP73 79 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 DEFB130AP0DP74 79 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 SLURP1P55000 103 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 TEN1Q86WV5 123 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 MUSTN1Q8IVN3 82 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
TCOF1-206ENST00000445265 GAGE7O76087 117 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 GAGE12FP0CL80 117 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 GAGE12GP0CL81 117 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 GAGE12IP0CL82 117 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 C20orf173Q96LM9 149 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
TCOF1-206ENST00000445265 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 TET2Q6N021 2002 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-206ENST00000445265 ODF3Q96PU9 254 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 HTTP42858 3142 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 CARD19Q96LW7 228 aa12.6□□□□□ -0.39
TCOF1-206ENST00000445265 S100A7L2Q5SY68 101 aa12.59□□□□□ -0.39
TCOF1-206ENST00000445265 CHD7Q9P2D1 2997 aa12.59□□□□□ -0.39
TCOF1-206ENST00000445265 CFHR3Q02985 330 aa12.59□□□□□ -0.39
TCOF1-206ENST00000445265 IGHG4P01861 327 aa12.59□□□□□ -0.39
TCOF1-206ENST00000445265 RBX1P62877 108 aa12.58□□□□□ -0.4
TCOF1-206ENST00000445265 ANKRD29Q8N6D5 301 aa12.58□□□□□ -0.4
TCOF1-206ENST00000445265 NRACQ8N912 160 aa12.58□□□□□ -0.4
TCOF1-206ENST00000445265 Q9H8V8 135 aa12.57□□□□□ -0.4
TCOF1-206ENST00000445265 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
TCOF1-206ENST00000445265 WNK1Q9H4A3 2382 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms