RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 C10orf105Q8TEF2 133 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 THEM6Q8WUY1 208 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 OR5P3Q8WZ94 311 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 MAL2Q969L2 176 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 SLAMF6Q96DU3 332 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 TSSK6Q9BXA6 273 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 OR2D2Q9H210 308 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 RERGLQ9H628 205 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 IDI2-AS1Q9NZ38 188 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-217ENST00000541578 DOCK11Q5JSL3 2073 aa2.49□□□□□ -2.01
SNHG1-217ENST00000541578 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 IGLC7A0M8Q6 106 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 NAP1L6A6NFF2 107 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF705FA8MVS1 300 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF670-ZNF695F2Z2N8 137 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 OR1I1O60431 355 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 DEDDO75618 318 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 IGHG2P01859 326 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 IL5P05113 134 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ATP5G1P05496 136 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF705DP0CH99 300 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF705BP0CI00 300 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF708P17019 499 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 G6PCP35575 357 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 DSCR4P56555 118 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 TPPP2P59282 170 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 PSG9Q00887 426 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ACOT6Q3I5F7 207 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 C1orf195Q5TG92 126 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 UNQ5815/PRO19632Q6UWF5 114 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 SBSNQ6UWP8 590 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 Q6ZQT7 251 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF550Q7Z398 422 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 LRP11Q86VZ4 500 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 DEFB125Q8N687 156 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 OR2T27Q8NH04 317 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 OR5AK2Q8NH90 309 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 SLC25A40Q8TBP6 338 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF721Q8TF20 911 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 WDR61Q9GZS3 305 aaKnown RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 SH3BGRL3Q9H299 93 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 TMEM242Q9NWH2 141 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 CCDC167Q9P0B6 97 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 PHLDA3Q9Y5J5 127 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 IER3IP1Q9Y5U9 82 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 SOX21Q9Y651 276 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-217ENST00000541578 PRR14LQ5THK1 2151 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 PLCE1Q9P212 2302 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
SNHG1-217ENST00000541578 TRBV24-1A0A075B6N3 115 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 IGHV3OR15-7A0A075B7D8 119 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 A0A1B0GW64 132 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 DUXBA0A1W2PPF3 345 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF860A6NHJ4 632 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 BBIP1A8MTZ0 92 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 C9JAW5 83 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 K7EP34 96 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 CCL22O00626 93 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 TAX1BP3O14907 124 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 OR2H2O95918 312 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 IGKV1D-33P01593 117 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 IGKV1-33P01594 117 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 IGHV3-53P01767 116 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 SCTP09683 121 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 SPINK8P0C7L1 97 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 LINC00032P0C843 101 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF728P0DKX0 622 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 IGLC2P0DOY2 106 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 IGLC3P0DOY3 106 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 TPT1P13693 172 aaKnown RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 RPL7P18124 248 aaKnown RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 BLVRBP30043 206 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF93P35789 620 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 GZMMP51124 257 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 FOXA1P55317 472 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 GNG5P63218 68 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 KLRD1Q13241 179 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ELOBQ15370 118 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 TDRG1Q3Y452 100 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 GLYATL3Q5SZD4 288 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 AMMECR1LQ6DCA0 310 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 Q6Q795 121 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 C3orf22Q8N5N4 141 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 OR52R1Q8NGF1 315 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 OR51A4Q8NGJ6 313 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 BORCS7Q96B45 105 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 MS4A6EQ96DS6 147 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 OR4C12Q96R67 309 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 RTBDNQ9BSG5 229 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 PROK2Q9HC23 129 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 RPRMQ9NS64 109 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ACER3Q9NUN7 267 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 TXNL4BQ9NX01 149 aaKnown RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ZNF492Q9P255 531 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 PRNDQ9UKY0 176 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 FUT9Q9Y231 359 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 HIGD1AQ9Y241 93 aa2.47□□□□□ -2.01
SNHG1-217ENST00000541578 ANK3Q12955 4377 aaKnown RBP2.47□□□□□ -2.01
SNHG1-217ENST00000541578 A0A096LNT2 108 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms