RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 KCNS1Q96KK3 526 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 ATP5SQ99766 215 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 Q9UF83 564 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 IGHV3-73A0A0B4J1V6 119 aa10.34□□□□□ -0.75
CHMP4A-203ENST00000527154 FAM240BA0A1B0GVZ2 78 aa10.34□□□□□ -0.75
CHMP4A-203ENST00000527154 ODF1Q14990 250 aa10.34□□□□□ -0.75
CHMP4A-203ENST00000527154 ZFP2Q6ZN57 461 aa10.34□□□□□ -0.75
CHMP4A-203ENST00000527154 UFSP1Q6NVU6 142 aa10.33□□□□□ -0.76
CHMP4A-203ENST00000527154 OR5C1Q8NGR4 320 aa10.33□□□□□ -0.76
CHMP4A-203ENST00000527154 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 PGPEP1LA6NFU8 196 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 H2AFB2P0C5Z0 115 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 DEFA1P59665 94 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 DEFA3P59666 94 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 KRTAP10-8P60410 259 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 RANP62826 216 aaKnown RBP10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 NHLH2Q02577 135 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 GAGE1Q13065 139 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 GAGE4Q13068 117 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 GAGE5Q13069 117 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 ZNF506Q5JVG8 444 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 PIK3CD-AS1Q5SR53 167 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 ASB13Q8WXK3 278 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 C11orf21Q9P2W6 132 aa10.32□□□□□ -0.76
CHMP4A-203ENST00000527154 OR7C2O60412 319 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 PRSS1P07477 247 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 Q0VG73 95 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 ELOBQ15370 118 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 ARL6IP6Q8N6S5 226 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 ENKURQ8TC29 256 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 PARLQ9H300 379 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 KCNIP2Q9NS61 270 aa10.31□□□□□ -0.76
CHMP4A-203ENST00000527154 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
CHMP4A-203ENST00000527154 ENHOQ6UWT2 76 aa10.3□□□□□ -0.76
CHMP4A-203ENST00000527154 URGCP-MRPS24S4R325 110 aa10.3□□□□□ -0.76
CHMP4A-203ENST00000527154 FAT4Q6V0I7 4981 aa10.3□□□□□ -0.76
CHMP4A-203ENST00000527154 A0A0J9YXV3 536 aa10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 UBE2L3P68036 154 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 RPL19P84098 196 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 SAMD10Q9BYL1 202 aa10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 WDR61Q9GZS3 305 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-203ENST00000527154 F6UZH7 168 aa10.28□□□□□ -0.76
CHMP4A-203ENST00000527154 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
CHMP4A-203ENST00000527154 C17orf112F2Z3M2 114 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 LRRC37A5PQ49AS3 106 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 RNF185Q96GF1 192 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 ZC2HC1AQ96GY0 325 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 HYLS1Q96M11 299 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 TREM1Q9NP99 234 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
CHMP4A-203ENST00000527154 A8MWV9 139 aa10.26□□□□□ -0.77
CHMP4A-203ENST00000527154 SIX6O95475 246 aa10.26□□□□□ -0.77
CHMP4A-203ENST00000527154 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
CHMP4A-203ENST00000527154 KRTAP26-1Q6PEX3 210 aa10.26□□□□□ -0.77
CHMP4A-203ENST00000527154 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
CHMP4A-203ENST00000527154 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
CHMP4A-203ENST00000527154 A0A087WX48 190 aa10.25□□□□□ -0.77
CHMP4A-203ENST00000527154 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
CHMP4A-203ENST00000527154 TAS2R45P59539 299 aa10.25□□□□□ -0.77
CHMP4A-203ENST00000527154 KHDC3LQ587J8 217 aa10.25□□□□□ -0.77
CHMP4A-203ENST00000527154 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
CHMP4A-203ENST00000527154 CMTM2Q8TAZ6 248 aa10.25□□□□□ -0.77
CHMP4A-203ENST00000527154 H0YIZ8 118 aa10.24□□□□□ -0.77
CHMP4A-203ENST00000527154 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
CHMP4A-203ENST00000527154 IFITM3Q01628 133 aa10.24□□□□□ -0.77
CHMP4A-203ENST00000527154 OR2T35Q8NGX2 323 aa10.24□□□□□ -0.77
CHMP4A-203ENST00000527154 NMES1Q9C002 83 aa10.24□□□□□ -0.77
CHMP4A-203ENST00000527154 A0A087WYN8 130 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 PGPA6NDG6 321 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 EIF3GO75821 320 aaKnown RBP eCLIP10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 FAM74A1Q5RGS3 127 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 GOLT1AQ6ZVE7 132 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 MARVELD1Q9BSK0 173 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
CHMP4A-203ENST00000527154 INMT-MINDY4F8WBC2 141 aa10.22□□□□□ -0.77
CHMP4A-203ENST00000527154 TAAR5O14804 337 aa10.22□□□□□ -0.77
CHMP4A-203ENST00000527154 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
CHMP4A-203ENST00000527154 WDR73Q6P4I2 378 aa10.22□□□□□ -0.77
CHMP4A-203ENST00000527154 TMEM75Q8N9X5 138 aa10.22□□□□□ -0.77
CHMP4A-203ENST00000527154 MBD2Q9UBB5 411 aa10.22□□□□□ -0.77
CHMP4A-203ENST00000527154 PHOX2AO14813 284 aa10.21□□□□□ -0.77
CHMP4A-203ENST00000527154 PTTG1O95997 202 aa10.21□□□□□ -0.77
CHMP4A-203ENST00000527154 SCGB1C1Q8TD33 95 aa10.21□□□□□ -0.77
CHMP4A-203ENST00000527154 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.77
CHMP4A-203ENST00000527154 JPT2Q9H910 190 aa10.21□□□□□ -0.77
CHMP4A-203ENST00000527154 PRR34Q9NV39 138 aa10.21□□□□□ -0.77
CHMP4A-203ENST00000527154 CYCSP99999 105 aaKnown RBP10.2□□□□□ -0.78
CHMP4A-203ENST00000527154 MIAQ16674 131 aa10.2□□□□□ -0.78
CHMP4A-203ENST00000527154 CLRN3Q8NCR9 226 aa10.2□□□□□ -0.78
CHMP4A-203ENST00000527154 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
CHMP4A-203ENST00000527154 RHODO00212 210 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms