RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
USP38-202ENST00000510377 RAI1Q7Z5J4 1906 aaPredicted RBP11.5□□□□□ -0.57
USP38-202ENST00000510377 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 MAPKAPK5-AS1Q8N8E1 139 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 NPBQ8NG41 125 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 A0A096LNJ9 63 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 VCX2Q9H322 139 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 H3BUX3 64 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 FOXI2Q6ZQN5 318 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
USP38-202ENST00000510377 IGLC6P0CF74 106 aa11.48□□□□□ -0.57
USP38-202ENST00000510377 C1orf122Q6ZSJ8 110 aa11.48□□□□□ -0.57
USP38-202ENST00000510377 Q8N9W7 124 aa11.48□□□□□ -0.57
USP38-202ENST00000510377 IGF1P05019 195 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 Q6ZQT7 251 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 HOXB4P17483 251 aaPredicted RBP11.47□□□□□ -0.57
USP38-202ENST00000510377 SNRPD3P62318 126 aaKnown RBP11.47□□□□□ -0.57
USP38-202ENST00000510377 Q8NA96 180 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 RNF185Q96GF1 192 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 SMAD5-AS1Q9Y6J3 95 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 AGRNO00468 2067 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 COL6A3P12111 3177 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 ZFP36P26651 326 aaKnown RBP11.47□□□□□ -0.57
USP38-202ENST00000510377 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
USP38-202ENST00000510377 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.57
USP38-202ENST00000510377 C9JAW5 83 aa11.46□□□□□ -0.57
USP38-202ENST00000510377 J3QKU1 62 aa11.46□□□□□ -0.57
USP38-202ENST00000510377 MRGPRG-AS1Q2M3A8 158 aa11.46□□□□□ -0.57
USP38-202ENST00000510377 ZNF876PQ49A33 203 aa11.46□□□□□ -0.57
USP38-202ENST00000510377 TTC32Q5I0X7 151 aa11.46□□□□□ -0.57
USP38-202ENST00000510377 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.58
USP38-202ENST00000510377 COX6CP09669 75 aa11.46□□□□□ -0.58
USP38-202ENST00000510377 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.58
USP38-202ENST00000510377 UBE2E1P51965 193 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 ERG28Q9UKR5 140 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 VCYO14598 125 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 SNCGO76070 127 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 PTH2Q96A98 100 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 HIGD1BQ9P298 99 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
USP38-202ENST00000510377 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 ANAPC13Q9BS18 74 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 SPXQ9BT56 116 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 CD28P10747 220 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 C11orf21Q9P2W6 132 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 U3KQK5 164 aa11.44□□□□□ -0.58
USP38-202ENST00000510377 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
USP38-202ENST00000510377 BOD1L1Q8NFC6 3051 aa11.43□□□□□ -0.58
USP38-202ENST00000510377 KNCNA6PVL3 124 aa11.43□□□□□ -0.58
USP38-202ENST00000510377 TAL2Q16559 108 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 SPAG8Q99932 426 aaPredicted RBP11.42□□□□□ -0.58
USP38-202ENST00000510377 JPT2Q9H910 190 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 TEX29Q8N6K0 151 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 PMVKQ15126 192 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 SPINK13Q1W4C9 94 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 ATP6V0BQ99437 205 aa11.42□□□□□ -0.58
USP38-202ENST00000510377 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
USP38-202ENST00000510377 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
USP38-202ENST00000510377 MTORP42345 2549 aa11.41□□□□□ -0.58
USP38-202ENST00000510377 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
USP38-202ENST00000510377 UFSP1Q6NVU6 142 aa11.41□□□□□ -0.58
USP38-202ENST00000510377 DUX3Q96PT4 197 aa11.41□□□□□ -0.58
USP38-202ENST00000510377 TNFRSF13BO14836 293 aaPredicted RBP11.41□□□□□ -0.58
USP38-202ENST00000510377 MRPS12O15235 138 aaKnown RBP11.41□□□□□ -0.58
USP38-202ENST00000510377 UNQ9165/PRO28630Q6UXU0 137 aa11.41□□□□□ -0.58
USP38-202ENST00000510377 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
USP38-202ENST00000510377 CCDC140Q96MF4 163 aa11.4□□□□□ -0.58
USP38-202ENST00000510377 RBAKDNA6NC62 111 aa11.4□□□□□ -0.58
USP38-202ENST00000510377 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.59
USP38-202ENST00000510377 LGALS1P09382 135 aaKnown RBP11.4□□□□□ -0.59
USP38-202ENST00000510377 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
USP38-202ENST00000510377 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
USP38-202ENST00000510377 DAZ1Q9NQZ3 744 aaKnown RBP11.39□□□□□ -0.59
USP38-202ENST00000510377 C11orf86A6NJI1 115 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 HHLA3Q9XRX5 114 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 J3QQQ9 107 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 GATD1Q8NB37 220 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 PLEKHB2Q96CS7 222 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 E9PLD3 99 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 INSL3P51460 131 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
USP38-202ENST00000510377 ZFP2Q6ZN57 461 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 TMEM95Q3KNT9 176 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 PPDPFLQ8WWR9 84 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 PRO1854Q9UHT4 67 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 ZFAND6Q6FIF0 208 aa11.37□□□□□ -0.59
USP38-202ENST00000510377 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
USP38-202ENST00000510377 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms