RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 AAMDCQ9H7C9 122 aa5□□□□□ -1.61
XRN1-212ENST00000486211 RABL2BQ9UNT1 228 aa5□□□□□ -1.61
XRN1-212ENST00000486211 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.99□□□□□ -1.61
XRN1-212ENST00000486211 RBAKDNA6NC62 111 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 PRSS47A8MTI9 375 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 DISC1C4P0D8 188 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 METTL15P1P0C7V9 234 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 SMIM18P0DKX4 95 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 ANXA3P12429 323 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 FGF8P55075 233 aaPredicted RBP4.99□□□□□ -1.61
XRN1-212ENST00000486211 MPV17L2Q567V2 206 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 MIC13Q5XKP0 118 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 UFSP1Q6NVU6 142 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 KCNIP4Q6PIL6 250 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 ZFP2Q6ZN57 461 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 OR2T35Q8NGX2 323 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 PRSS3P2Q8NHM4 247 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 TRIM63Q969Q1 353 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 PTH2Q96A98 100 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 ATP5SQ99766 215 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 PRR34Q9NV39 138 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 PSENENQ9NZ42 101 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 MGAT4CQ9UBM8 478 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 LENEPQ9Y5L5 61 aa4.99□□□□□ -1.61
XRN1-212ENST00000486211 IGKV2-24A0A0C4DH68 120 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 FAM24AA6NFZ4 105 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 ANGP03950 147 aaKnown RBP4.98□□□□□ -1.61
XRN1-212ENST00000486211 OR10G7Q8NGN6 311 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 OR1L4Q8NGR5 311 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 SMIM8Q96KF7 97 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 PRRT1Q99946 306 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 SDF2L1Q9HCN8 221 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 SLC39A9Q9NUM3 307 aa4.98□□□□□ -1.61
XRN1-212ENST00000486211 PIGBOS1A0A0B4J2F0 54 aa4.97□□□□□ -1.61
XRN1-212ENST00000486211 NDUFS6O75380 124 aaKnown RBP4.97□□□□□ -1.61
XRN1-212ENST00000486211 CAMLGP49069 296 aa4.97□□□□□ -1.61
XRN1-212ENST00000486211 LSM3P62310 102 aaKnown RBP4.97□□□□□ -1.61
XRN1-212ENST00000486211 SSBP1Q04837 148 aaKnown RBP4.97□□□□□ -1.61
XRN1-212ENST00000486211 Q6ZRG5 221 aa4.97□□□□□ -1.61
XRN1-212ENST00000486211 C12orf45Q8N5I9 185 aaPredicted RBP4.97□□□□□ -1.61
XRN1-212ENST00000486211 ASB13Q8WXK3 278 aa4.97□□□□□ -1.61
XRN1-212ENST00000486211 PFDN5Q99471 154 aa4.97□□□□□ -1.61
XRN1-212ENST00000486211 A0A096LNI7 61 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 TRAV21A0A0B4J279 112 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 FAM25AB3EWG3 89 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 FAM25CB3EWG5 89 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 FAM25GB3EWG6 89 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 TMEM262E9PQX1 116 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 SSSCA1O60232 199 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 AKAIN1P0CW23 69 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 CLPSL2Q6UWE3 100 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 NRARPQ7Z6K4 114 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 CLVS1Q8IUQ0 354 aaPredicted RBP4.96□□□□□ -1.62
XRN1-212ENST00000486211 TVP23CQ96ET8 276 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 PHYHIPLQ96FC7 376 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 KCNS1Q96KK3 526 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 FAM167A-AS1Q96KT0 104 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 GGACTQ9BVM4 153 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 SLC25A2Q9BXI2 301 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 GPN1Q9HCN4 374 aaPredicted RBP4.96□□□□□ -1.62
XRN1-212ENST00000486211 EXTL2Q9UBQ6 330 aa4.96□□□□□ -1.62
XRN1-212ENST00000486211 IGLV10-54A0A075B6I4 117 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 A0A087WWL8 130 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 F6UZH7 168 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 NBEAP1P0C6P0 100 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 RNASE3P12724 160 aaKnown RBP4.95□□□□□ -1.62
XRN1-212ENST00000486211 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
XRN1-212ENST00000486211 INO80EQ8NBZ0 244 aaPredicted RBP4.95□□□□□ -1.62
XRN1-212ENST00000486211 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 TMED6Q8WW62 240 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 SCGB3A2Q96PL1 93 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 JPT2Q9H910 190 aa4.95□□□□□ -1.62
XRN1-212ENST00000486211 TRBV6-8A0A0A6YYG3 113 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 A8MWV9 139 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 IFNA7P01567 189 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 UBE2D3P61077 147 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 UBE2D2P62837 147 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 NEDD8Q15843 81 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 TMEM128Q5BJH2 165 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 CFAP161Q6P656 301 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 LINC00269Q8N2A0 174 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 C15orf40Q8WUR7 153 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 SMIM4Q8WVI0 70 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 FXYD5Q96DB9 178 aa4.94□□□□□ -1.62
XRN1-212ENST00000486211 IGLV1-50A0A075B6I6 118 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 TSC22D2O75157 780 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 RPS10P46783 165 aaKnown RBP4.93□□□□□ -1.62
XRN1-212ENST00000486211 CSN1S1P47710 185 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 RPL29P47914 159 aaKnown RBP4.93□□□□□ -1.62
XRN1-212ENST00000486211 GCSAMLQ5JQS6 135 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 PIK3CD-AS1Q5SR53 167 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 MZT2BQ6NZ67 158 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 Q6ZNX1 250 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 DYNC2LI1Q8TCX1 351 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 GFRA4Q9GZZ7 299 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 SCP2D1Q9UJQ7 156 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 WDR83OSQ9Y284 106 aa4.93□□□□□ -1.62
XRN1-212ENST00000486211 ANKRD20A5PA0PJZ0 165 aa4.92□□□□□ -1.62
XRN1-212ENST00000486211 TAS2R30P59541 319 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms