RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LINC00694P0DN24 101 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 S100A11P31949 105 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 BTCP35070 178 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 CSN1S1P47710 185 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 SULT1A1P50225 295 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 CFAP126Q5VTH2 177 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 CST9LP1Q5W188 147 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 Q8N976 141 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 ATP6V0E2Q8NHE4 81 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 DNAJC30Q96LL9 226 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 PAXXQ9BUH6 204 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 NPCDR1Q9BY65 106 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 OR51M1Q9H341 326 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 LYRM2Q9NU23 88 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 LSM5Q9Y4Y9 91 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 COX11Q9Y6N1 276 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 MUC2Q02817 5179 aa3.33□□□□□ -1.88
SNRNP40-204ENST00000474025 IGHV3-73A0A0B4J1V6 119 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 TRAV21A0A0B4J279 112 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 NAP1L6A6NFF2 107 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 GGTLC3B5MD39 225 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 DIRC3C9JPN6 131 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 F6UZH7 168 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 CIDEAO60543 219 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 RANP62826 216 aaKnown RBP3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 HBG1P69891 147 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 HBG2P69892 147 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 ZNF876PQ49A33 203 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 STX12Q86Y82 276 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 TMEM252Q8N6L7 170 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 TMED6Q8WW62 240 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 SDF2L1Q9HCN8 221 aa3.32□□□□□ -1.88
SNRNP40-204ENST00000474025 IGKV2D-24A0A075B6R9 120 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 TRAV8-1A0A0A6YYK1 113 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 OR7C2O60412 319 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 MGST1P10620 155 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 PVALBP20472 110 aaPredicted RBP3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 INPP1P49441 399 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 UBE2L3P68036 154 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 ATP6V1FQ16864 119 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 ZNF506Q5JVG8 444 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 SPANXN2Q5MJ10 180 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 TRIQKQ629K1 86 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 HSD17B11Q8NBQ5 300 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 THAP6Q8TBB0 222 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 ASB13Q8WXK3 278 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 RMI2Q96E14 147 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 TVP23CQ96ET8 276 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 KCNS1Q96KK3 526 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 C9orf85Q96MD7 179 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 ATP5SQ99766 215 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 C11orf21Q9P2W6 132 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 Q9UF83 564 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 RPH3ALQ9UNE2 315 aa3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 CHTOPQ9Y3Y2 248 aaKnown RBP3.31□□□□□ -1.88
SNRNP40-204ENST00000474025 A0A087WWC5 75 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 GAGE12JA6NER3 117 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 S100A5P33763 92 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 ASIPP42127 132 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 S100A10P60903 97 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 GAGE1Q13065 139 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 GAGE4Q13068 117 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 GAGE5Q13069 117 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 IL15RAQ13261 267 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 ATRAIDQ6UW56 229 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 Q6ZRU5 148 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 GOLT1AQ6ZVE7 132 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 NIT1Q86X76 327 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 CYB561D1Q8N8Q1 229 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 PTH2Q96A98 100 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 C2orf50Q96LR7 162 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 HYLS1Q96M11 299 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 SH3BGRL3Q9H299 93 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 TREM1Q9NP99 234 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 OTORQ9NRC9 128 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 KCNIP2Q9NS61 270 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 KLK12Q9UKR0 248 aa3.3□□□□□ -1.88
SNRNP40-204ENST00000474025 PANO1I0J062 215 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 EIF3GO75821 320 aaKnown RBP eCLIP3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 SEC11BP0C7V7 166 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 RNASE3P12724 160 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 ZNF80P51504 273 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 NHLH2Q02577 135 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 CNPY1Q3B7I2 92 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 C14orf177Q52M58 125 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 KHDC3LQ587J8 217 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 UFSP1Q6NVU6 142 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 ZFP2Q6ZN57 461 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 OR5C1Q8NGR4 320 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 CMTM2Q8TAZ6 248 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 SUN5Q8TC36 379 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 SDHCQ99643 169 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 SEC22CQ9BRL7 303 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 CHCHD7Q9BUK0 85 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 SAMD10Q9BYL1 202 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 KRTAP3-1Q9BYR8 98 aa3.29□□□□□ -1.88
SNRNP40-204ENST00000474025 WDR61Q9GZS3 305 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms