RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 EMP1P54849 157 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 PIMREGQ9BSJ6 248 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 ZFYVE26Q68DK2 2539 aa10.22□□□□□ -0.77
HERPUD1-204ENST00000439977 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
HERPUD1-204ENST00000439977 PIEZO1Q92508 2521 aa10.22□□□□□ -0.77
HERPUD1-204ENST00000439977 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
HERPUD1-204ENST00000439977 ACACBO00763 2458 aa10.22□□□□□ -0.77
HERPUD1-204ENST00000439977 A0A087WWL8 130 aa10.21□□□□□ -0.77
HERPUD1-204ENST00000439977 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
HERPUD1-204ENST00000439977 FAM208BQ5VWN6 2430 aa10.21□□□□□ -0.77
HERPUD1-204ENST00000439977 OVOL1O14753 267 aa10.21□□□□□ -0.78
HERPUD1-204ENST00000439977 IGHG2P01859 326 aa10.21□□□□□ -0.78
HERPUD1-204ENST00000439977 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.78
HERPUD1-204ENST00000439977 AGRNO00468 2067 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 FABP2P12104 132 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 MRAP2Q96G30 205 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 DPH3P1Q9H4G8 78 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 TRAV12-3A0A0B4J271 114 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 C10orf105Q8TEF2 133 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 CSTL1Q9H114 145 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 K7ERU9 68 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 CLEC2AQ6UVW9 174 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 C2orf66Q6UXQ4 117 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 CEND1Q8N111 149 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-204ENST00000439977 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 IGSF10Q6WRI0 2623 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 A6NDX4 124 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 F5H697 171 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 FAM74A4Q5TZK3 123 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 MTURNQ8N3F0 131 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 USMG5Q96IX5 58 aa10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 DAZ1Q9NQZ3 744 aaKnown RBP10.19□□□□□ -0.78
HERPUD1-204ENST00000439977 PRSS47A8MTI9 375 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 F8VRH5 84 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 H7C1H1 209 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 ZNF688P0C7X2 276 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 CYSLTR1Q9Y271 337 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 MXRA5Q9NR99 2828 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 RNF223E7ERA6 249 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 DUX5Q96PT3 197 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 MUC4Q99102 2169 aa10.18□□□□□ -0.78
HERPUD1-204ENST00000439977 DUSP14O95147 198 aaKnown RBP10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 CD7P09564 240 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 PLNP26678 52 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 CRIP2P52943 208 aaPredicted RBP10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 RPL24P83731 157 aaKnown RBP10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 ORMDL2Q53FV1 153 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 DOPEY1Q5JWR5 2465 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 MSMBP08118 114 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 FAM159AQ6UWV7 190 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 AMTNQ6UX39 209 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 PRORYQ9H606 182 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 OR11H12B2RN74 326 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 IGHV4-59P01825 116 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 OR11H1Q8NG94 326 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 PHLDA1Q8WV24 401 aaPredicted RBP10.17□□□□□ -0.78
HERPUD1-204ENST00000439977 FBN2P35556 2912 aa10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 CD300EQ496F6 205 aaPredicted RBP10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 NEXN-AS1Q8NBZ9 246 aa10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 KLHL30-AS1Q8NEE0 82 aa10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
HERPUD1-204ENST00000439977 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
HERPUD1-204ENST00000439977 FAM19A4Q96LR4 140 aa10.15□□□□□ -0.78
HERPUD1-204ENST00000439977 TM2D2Q9BX73 214 aa10.15□□□□□ -0.78
HERPUD1-204ENST00000439977 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
HERPUD1-204ENST00000439977 SCGB2A2Q13296 93 aa10.15□□□□□ -0.78
HERPUD1-204ENST00000439977 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
HERPUD1-204ENST00000439977 LRRK2Q5S007 2527 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 IGLV1-40P01703 118 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 C12orf74Q32Q52 190 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 HTN1P15515 57 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 DCANP1Q8TF63 244 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 ATP6V0BQ99437 205 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
HERPUD1-204ENST00000439977 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 H3BMG7 143 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 LINC00315P59091 139 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 IGLL5B9A064 214 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 DEFB112Q30KQ8 113 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 SLC25A16P16260 332 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 SCGB1D4Q6XE38 83 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 OR5A1Q8NGJ0 315 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
HERPUD1-204ENST00000439977 ZNF479Q96JC4 524 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms