RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-202ENST00000409915 LINC00596Q86U02 117 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF695Q8IW36 515 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 OR9G1Q8NH87 305 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ARHGAP5-AS1Q96IT6 56 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 LINC01600Q96MT4 127 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 C8orf49Q96NF6 230 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 LINC01587Q99440 93 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 PECRQ9BY49 303 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 NAA60Q9H7X0 242 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 TP53TG1Q9Y2A0 90 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 HILPDAQ9Y5L2 63 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 TENM1Q9UKZ4 2725 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 DSCAML1Q8TD84 2053 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 RBMY1BA6NDE4 496 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 RBMY1EA6NEQ0 496 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 C9JCJ5 164 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 H3BUX3 64 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 BMPR1BO00238 502 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 RBP4P02753 201 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 RBMY1DP0C7P1 496 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 SMIM13P0DJ93 91 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 RBMY1A1P0DJD3 496 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 CGB3P0DN86 165 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 CGB7P0DN87 165 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 ORM2P19652 201 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 NPPCP23582 126 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 CD24P25063 80 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 KIR2DS2P43631 304 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 DYNLT3P51808 116 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 DIAPH2-AS1Q14236 149 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 SBSPONQ8IVN8 264 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 OR11H6Q8NGC7 330 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 OR5C1Q8NGR4 320 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 TMEM158Q8WZ71 300 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 CHCHD1Q96BP2 118 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 DUX3Q96PT4 197 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 C20orf78Q9BR46 151 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 FAM103A1Q9BTL3 118 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 KCNIP2Q9NS61 270 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 IDI2-AS1Q9NZ38 188 aa3.46□□□□□ -1.86
SF3B1-202ENST00000409915 YTHDF2Q9Y5A9 579 aaKnown RBP3.46□□□□□ -1.86
SF3B1-202ENST00000409915 IGHV3-72A0A0B4J1Y9 119 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 FAM24AA6NFZ4 105 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 SDCBPO00560 298 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-202ENST00000409915 NAPSAO96009 420 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 IGLV1-47P01700 117 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 APOA2P02652 100 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 SLC25A5P05141 298 aaKnown RBP3.45□□□□□ -1.86
SF3B1-202ENST00000409915 PRSS2P07478 247 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 SCTP09683 121 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 IFITM1P13164 125 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 HLA-DRB4P13762 266 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 G6PCP35575 357 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 OPRK1P41145 380 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 APOC4P55056 127 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 ZNF90Q03938 601 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 TMEM30BQ3MIR4 351 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 Q56UQ5 140 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 NMSQ5H8A3 153 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
SF3B1-202ENST00000409915 GAPTQ8N292 157 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 OR10G7Q8NGN6 311 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 PRSS3P2Q8NHM4 247 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 SCGB1C1Q8TD33 95 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 PPDPFLQ8WWR9 84 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 C11orf52Q96A22 123 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 TMEM101Q96IK0 257 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 C9orf85Q96MD7 179 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 SLC39A9Q9NUM3 307 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 HLA-DRB4X5D2U9 266 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
SF3B1-202ENST00000409915 IGHV4OR15-8A0A075B7B6 117 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 IGKV1-6A0A0C4DH72 117 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 C9JAW5 83 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 LINC01619G3V211 115 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 BUB1B-PAK6H3BSN5 160 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 H7C1H1 209 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 K7EQD1 137 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 ERVK-16P61578 105 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 GNB1P62873 340 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 ARFRP1Q13795 201 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 ETDBQ3ZM63 59 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 MINOS1Q5TGZ0 78 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 AMTNQ6UX39 209 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 LYZL2Q7Z4W2 148 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 RPP25LQ8N5L8 163 aaKnown RBP3.44□□□□□ -1.86
SF3B1-202ENST00000409915 TMEM86BQ8N661 226 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 DRAM1Q8N682 238 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 OR4C13Q8NGP0 309 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 OR10J6PQ8NGY7 276 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 MYOZ3Q8TDC0 251 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 ZC2HC1AQ96GY0 325 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 PRSS22Q9GZN4 317 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 LINC00574Q9H8X3 128 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms