RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 EPDR1Q9UM22 224 aa11.59□□□□□ -0.55
HMGN1-204ENST00000380749 IGLV5-52A0A0A0MRZ9 124 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 IGHV3-73A0A0B4J1V6 119 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 IGLV2-11P01706 119 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 SAPCD1Q5SSQ6 148 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 LELP1Q5T871 98 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 Q5VSD8 79 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-204ENST00000380749 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 TNFSF18Q9UNG2 199 aa11.58□□□□□ -0.56
HMGN1-204ENST00000380749 PTTG1O95997 202 aa11.57□□□□□ -0.56
HMGN1-204ENST00000380749 GTSF1LQ9H1H1 148 aa11.57□□□□□ -0.56
HMGN1-204ENST00000380749 PGPEP1LA6NFU8 196 aa11.56□□□□□ -0.56
HMGN1-204ENST00000380749 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
HMGN1-204ENST00000380749 RNASE3P12724 160 aaKnown RBP11.56□□□□□ -0.56
HMGN1-204ENST00000380749 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
HMGN1-204ENST00000380749 INO80EQ8NBZ0 244 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-204ENST00000380749 ATP6V0E2Q8NHE4 81 aa11.56□□□□□ -0.56
HMGN1-204ENST00000380749 A0A1W2PRE2 83 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 LRCOL1A6NCL2 159 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 A8MWV9 139 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 IGHV3-30P01768 117 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 IGHV3-33P01772 117 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 IGHV3-30-3P0DP02 117 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 IGHV3-30-5P0DP03 117 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 LAGE3Q14657 143 aa11.55□□□□□ -0.56
HMGN1-204ENST00000380749 BORCS7-ASMTA0A0B4J1R7 106 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-204ENST00000380749 ZFP2Q6ZN57 461 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 IFNA7P01567 189 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 ASIPP42127 132 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 PIK3CD-AS1Q5SR53 167 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 Q8N814 137 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 PARLQ9H300 379 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 BATF3Q9NR55 127 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
HMGN1-204ENST00000380749 FABP5P3A8MUU1 101 aa11.53□□□□□ -0.56
HMGN1-204ENST00000380749 LGALSLQ3ZCW2 172 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-204ENST00000380749 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
HMGN1-204ENST00000380749 Q86TA4 180 aa11.53□□□□□ -0.56
HMGN1-204ENST00000380749 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
HMGN1-204ENST00000380749 FXYD6-FXYD2A0A087WZ82 144 aa11.52□□□□□ -0.57
HMGN1-204ENST00000380749 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.57
HMGN1-204ENST00000380749 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.57
HMGN1-204ENST00000380749 PEX7O00628 323 aa11.52□□□□□ -0.57
HMGN1-204ENST00000380749 UBE2G2P60604 165 aa11.52□□□□□ -0.57
HMGN1-204ENST00000380749 NKX6-2Q9C056 277 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-204ENST00000380749 IL36BQ9NZH7 164 aa11.52□□□□□ -0.57
HMGN1-204ENST00000380749 RNF222A6NCQ9 220 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 GAGE12JA6NER3 117 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 FAM229AH3BQW9 127 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 GAGE1Q13065 139 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 GAGE4Q13068 117 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 GAGE5Q13069 117 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 Q5BKY6 102 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 AKR1C8PQ5T2L2 129 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 SYT8Q8NBV8 401 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 LINC00479Q96M42 142 aa11.51□□□□□ -0.57
HMGN1-204ENST00000380749 B4DEV8 164 aa11.5□□□□□ -0.57
HMGN1-204ENST00000380749 H3BVH4 76 aa11.5□□□□□ -0.57
HMGN1-204ENST00000380749 RHODO00212 210 aa11.5□□□□□ -0.57
HMGN1-204ENST00000380749 SMR3BP02814 79 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-204ENST00000380749 ZNF726P1Q15940 193 aa11.5□□□□□ -0.57
HMGN1-204ENST00000380749 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
HMGN1-204ENST00000380749 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
HMGN1-204ENST00000380749 A0A087WWC5 75 aa11.49□□□□□ -0.57
HMGN1-204ENST00000380749 TRAV8-3A0A0A6YYJ7 113 aa11.49□□□□□ -0.57
HMGN1-204ENST00000380749 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-204ENST00000380749 HAMPP81172 84 aa11.49□□□□□ -0.57
HMGN1-204ENST00000380749 Q6ZSN1 163 aa11.49□□□□□ -0.57
HMGN1-204ENST00000380749 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
HMGN1-204ENST00000380749 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
HMGN1-204ENST00000380749 OR2T35Q8NGX2 323 aa11.48□□□□□ -0.57
HMGN1-204ENST00000380749 UBE2G1P62253 170 aa11.47□□□□□ -0.57
HMGN1-204ENST00000380749 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
HMGN1-204ENST00000380749 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
HMGN1-204ENST00000380749 MAP1LC3B2A6NCE7 125 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 M0R036 132 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 C1QBP02746 253 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 DNLZQ5SXM8 178 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 FAM74A4Q5TZK3 123 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 UFSP1Q6NVU6 142 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 Q8N3U1 123 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 C14orf178Q8N769 122 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-204ENST00000380749 FMC1Q96HJ9 113 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 MAP1LC3BQ9GZQ8 125 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 JPT2Q9H910 190 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 URGCP-MRPS24S4R325 110 aa11.46□□□□□ -0.57
HMGN1-204ENST00000380749 KRBOX1C9JBD0 128 aa11.45□□□□□ -0.58
HMGN1-204ENST00000380749 SH2D1AO60880 128 aa11.45□□□□□ -0.58
HMGN1-204ENST00000380749 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
HMGN1-204ENST00000380749 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
HMGN1-204ENST00000380749 DAZ4Q86SG3 579 aaKnown RBP11.45□□□□□ -0.58
HMGN1-204ENST00000380749 TCEAL7Q9BRU2 100 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 247.7 ms