RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 RPL39LQ96EH5 51 aaKnown RBP15.23■□□□□ 0.03
LMO4-202ENST00000370544 TMEM126AQ9H061 195 aa15.23■□□□□ 0.03
LMO4-202ENST00000370544 DOCK10Q96BY6 2186 aa15.23■□□□□ 0.03
LMO4-202ENST00000370544 SIRPDQ9H106 197 aa15.23■□□□□ 0.03
LMO4-202ENST00000370544 KMT2EQ8IZD2 1858 aa15.23■□□□□ 0.03
LMO4-202ENST00000370544 ZFHX2Q9C0A1 2572 aaPredicted RBP15.23■□□□□ 0.03
LMO4-202ENST00000370544 Q6ZQT7 251 aa15.22■□□□□ 0.03
LMO4-202ENST00000370544 K7EP34 96 aa15.22■□□□□ 0.03
LMO4-202ENST00000370544 K7ERJ3 54 aa15.21■□□□□ 0.03
LMO4-202ENST00000370544 CGB3P0DN86 165 aa15.21■□□□□ 0.03
LMO4-202ENST00000370544 E7EUB6 86 aa15.21■□□□□ 0.03
LMO4-202ENST00000370544 NCKAP5O14513 1909 aa15.21■□□□□ 0.03
LMO4-202ENST00000370544 SPANXA1Q9NS26 97 aa15.21■□□□□ 0.03
LMO4-202ENST00000370544 PIFOQ8TCI5 191 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 IGKV2D-24A0A075B6R9 120 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 C2orf70A6NJV1 201 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 K7EQD1 137 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 MSRB1Q9NZV6 116 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 PRAC2D3DTV9 90 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 IGKV1OR2-108A0A075B7D4 117 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 CRLF1O75462 422 aa15.2■□□□□ 0.02
LMO4-202ENST00000370544 A0A1W2PPM0 123 aa15.19■□□□□ 0.02
LMO4-202ENST00000370544 K7EMT4 169 aa15.19■□□□□ 0.02
LMO4-202ENST00000370544 MED13Q9UHV7 2174 aa15.19■□□□□ 0.02
LMO4-202ENST00000370544 F8W1H4 67 aa15.19■□□□□ 0.02
LMO4-202ENST00000370544 PPDPFLQ8WWR9 84 aa15.19■□□□□ 0.02
LMO4-202ENST00000370544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMO4-202ENST00000370544 EDA2RQ9HAV5 297 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 IGHG2P01859 326 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 ADAMTS9Q9P2N4 1935 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 EML6Q6ZMW3 1958 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 OBSL1O75147 1896 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 SLC25A29Q8N8R3 303 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 Q9H8V8 135 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 MRPL36Q9P0J6 103 aaKnown RBP15.18■□□□□ 0.02
LMO4-202ENST00000370544 C9orf47Q6ZRZ4 202 aa15.18■□□□□ 0.02
LMO4-202ENST00000370544 TMEM89A2RUT3 159 aa15.17■□□□□ 0.02
LMO4-202ENST00000370544 GYPEP15421 78 aa15.17■□□□□ 0.02
LMO4-202ENST00000370544 GPHB5Q86YW7 130 aa15.17■□□□□ 0.02
LMO4-202ENST00000370544 TRAV25A0A0B4J276 109 aa15.17■□□□□ 0.02
LMO4-202ENST00000370544 CARD19Q96LW7 228 aa15.16■□□□□ 0.02
LMO4-202ENST00000370544 BOD1L2Q8IYS8 172 aa15.16■□□□□ 0.02
LMO4-202ENST00000370544 TEX48A0A1B0GUV7 120 aa15.16■□□□□ 0.02
LMO4-202ENST00000370544 ETDBQ3ZM63 59 aa15.16■□□□□ 0.02
LMO4-202ENST00000370544 ZFP2Q6ZN57 461 aa15.16■□□□□ 0.02
LMO4-202ENST00000370544 C12orf74Q32Q52 190 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 C4orf3Q8WVX3 66 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 Q8N1Y9 231 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 GTSF1Q8WW33 167 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 PCP2Q8IVA1 136 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 TECTAO75443 2155 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 RPL32P62910 135 aaKnown RBP15.15■□□□□ 0.02
LMO4-202ENST00000370544 ATP6V0E2Q8NHE4 81 aa15.15■□□□□ 0.02
LMO4-202ENST00000370544 ATP5G1P05496 136 aa15.14■□□□□ 0.02
LMO4-202ENST00000370544 SPART-AS1P0CW21 52 aa15.14■□□□□ 0.02
LMO4-202ENST00000370544 UTF1Q5T230 341 aa15.14■□□□□ 0.01
LMO4-202ENST00000370544 ICOSQ9Y6W8 199 aa15.14■□□□□ 0.01
LMO4-202ENST00000370544 DAZ2Q13117 558 aaKnown RBP15.14■□□□□ 0.01
LMO4-202ENST00000370544 RBMY1FQ15415 496 aaKnown RBP15.14■□□□□ 0.01
LMO4-202ENST00000370544 DAZ4Q86SG3 579 aaKnown RBP15.14■□□□□ 0.01
LMO4-202ENST00000370544 DAZ3Q9NR90 486 aaKnown RBP15.14■□□□□ 0.01
LMO4-202ENST00000370544 LURAP1LQ8IV03 231 aa15.14■□□□□ 0.01
LMO4-202ENST00000370544 MRPL23Q16540 153 aaKnown RBP15.13■□□□□ 0.01
LMO4-202ENST00000370544 COA6Q5JTJ3 125 aaKnown RBP15.13■□□□□ 0.01
LMO4-202ENST00000370544 UBL5Q9BZL1 73 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 Q9HAA7 133 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 A6NDX4 124 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 HERV-K104P63124 156 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 C5orf38Q86SI9 138 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 K7EP13 123 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 CGB7P0DN87 165 aa15.13■□□□□ 0.01
LMO4-202ENST00000370544 TMEM131Q92545 1883 aa15.12■□□□□ 0.01
LMO4-202ENST00000370544 ZNF106Q9H2Y7 1883 aaKnown RBP15.12■□□□□ 0.01
LMO4-202ENST00000370544 H3BMG7 143 aa15.12■□□□□ 0.01
LMO4-202ENST00000370544 MYCNOSP40205 109 aa15.12■□□□□ 0.01
LMO4-202ENST00000370544 C1orf43Q9BWL3 253 aa15.12■□□□□ 0.01
LMO4-202ENST00000370544 DSCR8Q96T75 97 aa15.12■□□□□ 0.01
LMO4-202ENST00000370544 NPSP0C0P6 89 aa15.11■□□□□ 0.01
LMO4-202ENST00000370544 FANCD2OSQ96PS1 177 aa15.11■□□□□ 0.01
LMO4-202ENST00000370544 C11orf1Q9H5F2 150 aa15.11■□□□□ 0.01
LMO4-202ENST00000370544 PRORYQ9H606 182 aa15.11■□□□□ 0.01
LMO4-202ENST00000370544 CREBBPQ92793 2442 aa15.11■□□□□ 0.01
LMO4-202ENST00000370544 NUPR1O60356 82 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 LINC00173Q6ZV60 143 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 PRSS47A8MTI9 375 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 TRBV12-3P01733 135 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 CFC1BP0CG36 223 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 CFC1P0CG37 223 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 UNQ9165/PRO28630Q6UXU0 137 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 PRO3102Q9H379 93 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 KIAA1549LQ6ZVL6 1849 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 NOTCH3Q9UM47 2321 aa15.1■□□□□ 0.01
LMO4-202ENST00000370544 ODF3BA8MYP8 253 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 DEFB1P60022 68 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 HAMPP81172 84 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 DENND4AQ7Z401 1863 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 MED14OSP0DP75 135 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 CDPF1Q6NVV7 123 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 AMTNQ6UX39 209 aa15.09■□□□□ 0.01
LMO4-202ENST00000370544 SH2D6Q7Z4S9 175 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms