RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ADAMTSL5Q6ZMM2 481 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 ODF3L1Q8IXM7 274 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 WFDC11Q8NEX6 87 aa14.42□□□□□ -0.1
CLIP2-202ENST00000361545 TEX22C9J3V5 150 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 PATE2Q6UY27 113 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 E7EUB6 86 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 C16orf54Q6UWD8 224 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 NAV2Q8IVL1 2488 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 DENND4AQ7Z401 1863 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 IGHG2P01859 326 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 C20orf144Q9BQM9 153 aa14.41□□□□□ -0.1
CLIP2-202ENST00000361545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.4□□□□□ -0.1
CLIP2-202ENST00000361545 IGKV2-29A2NJV5 120 aaPredicted RBP14.4□□□□□ -0.1
CLIP2-202ENST00000361545 DNAJC9-AS1A6NH13 148 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 MRPL35Q9NZE8 188 aaKnown RBP14.4□□□□□ -0.1
CLIP2-202ENST00000361545 LENEPQ9Y5L5 61 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 H3BMM0 161 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 CD5LO43866 347 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 OCIAD2Q56VL3 154 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 UBE2WQ96B02 151 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 NDUFA12Q9UI09 145 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 LMO4P61968 165 aa14.4□□□□□ -0.1
CLIP2-202ENST00000361545 KLF5Q13887 457 aaPredicted RBP14.4□□□□□ -0.1
CLIP2-202ENST00000361545 SPINK8P0C7L1 97 aa14.4□□□□□ -0.11
CLIP2-202ENST00000361545 SRSF2Q01130 221 aaKnown RBP14.4□□□□□ -0.11
CLIP2-202ENST00000361545 LOXL1Q08397 574 aaPredicted RBP14.4□□□□□ -0.11
CLIP2-202ENST00000361545 SPART-AS1P0CW21 52 aa14.39□□□□□ -0.11
CLIP2-202ENST00000361545 ZNF843Q8N446 348 aa14.39□□□□□ -0.11
CLIP2-202ENST00000361545 C20orf78Q9BR46 151 aa14.39□□□□□ -0.11
CLIP2-202ENST00000361545 KLF12Q9Y4X4 402 aa14.39□□□□□ -0.11
CLIP2-202ENST00000361545 PIEZO2Q9H5I5 2752 aa14.38□□□□□ -0.11
CLIP2-202ENST00000361545 GYPEP15421 78 aa14.38□□□□□ -0.11
CLIP2-202ENST00000361545 DEFB4AO15263 64 aa14.38□□□□□ -0.11
CLIP2-202ENST00000361545 MYCNOSP40205 109 aa14.38□□□□□ -0.11
CLIP2-202ENST00000361545 DEFB1P60022 68 aa14.38□□□□□ -0.11
CLIP2-202ENST00000361545 C16orf74Q96GX8 76 aa14.37□□□□□ -0.11
CLIP2-202ENST00000361545 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
CLIP2-202ENST00000361545 TRBV12-3P01733 135 aa14.37□□□□□ -0.11
CLIP2-202ENST00000361545 GATA1P15976 413 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-202ENST00000361545 NACAE9PAV3 2078 aa14.37□□□□□ -0.11
CLIP2-202ENST00000361545 ATP5G1P05496 136 aa14.37□□□□□ -0.11
CLIP2-202ENST00000361545 DEFB135Q30KP9 77 aa14.37□□□□□ -0.11
CLIP2-202ENST00000361545 CRYGCP07315 174 aa14.36□□□□□ -0.11
CLIP2-202ENST00000361545 A6NDX4 124 aa14.36□□□□□ -0.11
CLIP2-202ENST00000361545 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
CLIP2-202ENST00000361545 HIST1H4AP62805 103 aaKnown RBP14.36□□□□□ -0.11
CLIP2-202ENST00000361545 HERVK_113P63121 156 aa14.36□□□□□ -0.11
CLIP2-202ENST00000361545 ABCA2Q9BZC7 2435 aa14.36□□□□□ -0.11
CLIP2-202ENST00000361545 C4orf3Q8WVX3 66 aa14.36□□□□□ -0.11
CLIP2-202ENST00000361545 MRPL36Q9P0J6 103 aaKnown RBP14.36□□□□□ -0.11
CLIP2-202ENST00000361545 COL4A4P53420 1690 aaPredicted RBP14.35□□□□□ -0.11
CLIP2-202ENST00000361545 IGLV2-14P01704 120 aa14.35□□□□□ -0.11
CLIP2-202ENST00000361545 OVOL2Q9BRP0 275 aa14.35□□□□□ -0.11
CLIP2-202ENST00000361545 TMEM126AQ9H061 195 aa14.35□□□□□ -0.11
CLIP2-202ENST00000361545 UNQ9165/PRO28630Q6UXU0 137 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 GPHB5Q86YW7 130 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 OBSL1O75147 1896 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 ZNF493Q6ZR52 646 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 C9JAW5 83 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 F8VRH5 84 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 EDA2RQ9HAV5 297 aa14.34□□□□□ -0.11
CLIP2-202ENST00000361545 TNFRSF13BO14836 293 aaPredicted RBP14.33□□□□□ -0.12
CLIP2-202ENST00000361545 C1orf43Q9BWL3 253 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 CRLF1O75462 422 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 RPL39LQ96EH5 51 aaKnown RBP14.33□□□□□ -0.12
CLIP2-202ENST00000361545 TMEM131Q92545 1883 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 IGLV10-54A0A075B6I4 117 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 WI2-2373I1.2A0A1W2PRP0 233 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 INAFM1C9JVW0 142 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 CCL18P55774 89 aa14.33□□□□□ -0.12
CLIP2-202ENST00000361545 MRPL23Q16540 153 aaKnown RBP14.33□□□□□ -0.12
CLIP2-202ENST00000361545 NCOA6Q14686 2063 aaPredicted RBP14.33□□□□□ -0.12
CLIP2-202ENST00000361545 K7EMT4 169 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 IGHV3-30P01768 117 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 IGHV3-33P01772 117 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 IGHV3-30-3P0DP02 117 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 IGHV3-30-5P0DP03 117 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 IGHV4-31P0DP07 118 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 Q6ZWC4 215 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 TMEM61Q8N0U2 210 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 LRRC75A-AS1Q8N1F1 130 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 DNAJC30Q96LL9 226 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 MSRB1Q9NZV6 116 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 ICOSQ9Y6W8 199 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 ATP6V0E2Q8NHE4 81 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 LINC01548A6NM66 108 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 RNF152Q8N8N0 203 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 SMAD5-AS1Q9Y6J3 95 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 KMT2EQ8IZD2 1858 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 C5orf38Q86SI9 138 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 SUMO4Q6EEV6 95 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 Q8N1Y9 231 aa14.32□□□□□ -0.12
CLIP2-202ENST00000361545 SCRT2Q9NQ03 307 aa14.31□□□□□ -0.12
CLIP2-202ENST00000361545 DKK2Q9UBU2 259 aa14.31□□□□□ -0.12
CLIP2-202ENST00000361545 LGALS9BQ3B8N2 356 aa14.31□□□□□ -0.12
CLIP2-202ENST00000361545 UTF1Q5T230 341 aa14.31□□□□□ -0.12
CLIP2-202ENST00000361545 LGALS9CQ6DKI2 356 aa14.31□□□□□ -0.12
CLIP2-202ENST00000361545 K7EQD1 137 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 C10orf91Q5T1B1 145 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 GAGE2AQ6NT46 116 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms