RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PSG7Q13046 419 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 PIK3CD-AS1Q5SR53 167 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 C11orf44Q8N8P7 122 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 CLEC2BQ92478 149 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 ARRDC1-AS1Q9H2J1 176 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 IGHV3-11P01762 117 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 PAX9P55771 341 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 DEFB105AQ8NG35 78 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 FAM168AQ92567 244 aa4.93□□□□□ -1.62
VCAN-203ENST00000343200 RPL18AQ02543 176 aaKnown RBP4.93□□□□□ -1.62
VCAN-203ENST00000343200 TRAV4A0A0B4J268 109 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 IGHV4OR15-8A0A075B7B6 117 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 A0A087WW49 117 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 HRCT1Q6UXD1 115 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 IGKV1D-8A0A087WSZ0 117 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 IGKV1-9A0A0C4DH69 117 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 GCN1Q92616 2671 aaKnown RBP4.92□□□□□ -1.62
VCAN-203ENST00000343200 COX7A2LO14548 114 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 NXPH4O95158 308 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 CISD3P0C7P0 127 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 EFNA4P52798 201 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 ZNF576Q9H609 170 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 ZNF71Q9NQZ8 489 aaPredicted RBP4.92□□□□□ -1.62
VCAN-203ENST00000343200 MRPL36Q9P0J6 103 aaKnown RBP4.92□□□□□ -1.62
VCAN-203ENST00000343200 IGHV1-69DA0A0B4J2H0 117 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 DKK1O94907 266 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 ZFP36L1Q07352 338 aaKnown RBP4.92□□□□□ -1.62
VCAN-203ENST00000343200 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 CFHR1Q03591 330 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 TRIP6Q15654 476 aaKnown RBP4.92□□□□□ -1.62
VCAN-203ENST00000343200 Q8N1Y9 231 aa4.92□□□□□ -1.62
VCAN-203ENST00000343200 K7EN84 100 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 CCL3L1P16619 93 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 IGHV1-8P0DP01 117 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 CELA3BP08861 270 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 FAM216BQ8N7L0 139 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 MAST4O15021 2626 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 SPAARA0A1B0GVQ0 90 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 BPY2O14599 106 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 PRR25Q96S07 402 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 SPATA12Q7Z6I5 190 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 GTSF1Q8WW33 167 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 AGPAT4-IT1Q9H0P7 198 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 QRFPP83859 136 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 LTBP2Q14767 1821 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 DAZ2Q13117 558 aaKnown RBP4.91□□□□□ -1.62
VCAN-203ENST00000343200 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 DAZ4Q86SG3 579 aaKnown RBP4.91□□□□□ -1.62
VCAN-203ENST00000343200 DAZ3Q9NR90 486 aaKnown RBP4.91□□□□□ -1.62
VCAN-203ENST00000343200 MSRB2Q9Y3D2 182 aa4.91□□□□□ -1.62
VCAN-203ENST00000343200 ENHOQ6UWT2 76 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 ETDCA0A1B0GVM5 59 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 MINOS1Q5TGZ0 78 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 WBP1Q96G27 269 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 MINOS1-NBL1R4GNA1 71 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 OOSP1A8MZH6 123 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 K7ENP7 123 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 VPREB3Q9UKI3 123 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 STAB1Q9NY15 2570 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 E9PLD3 99 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 PRORYQ9H606 182 aa4.9□□□□□ -1.62
VCAN-203ENST00000343200 LINC00473A8K010 186 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 H0Y9J4 135 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 P0DMU3 169 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 FAM231AP0DMU4 169 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 FAM231CP0DMU5 169 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 ODF1Q14990 250 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 TEX36Q5VZQ5 186 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 WIPF3A6NGB9 483 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 XCL1P47992 114 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 Q6Q795 121 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 TOMM6Q96B49 74 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 PRSS22Q9GZN4 317 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 LINC01619G3V211 115 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 NRGNQ92686 78 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 KLK9Q9UKQ9 250 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 SIGLEC9Q9Y336 463 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 HOXB4P17483 251 aaPredicted RBP4.9□□□□□ -1.63
VCAN-203ENST00000343200 Q6ZS92 163 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 CRIPAKQ8N1N5 446 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 FXYD5Q96DB9 178 aa4.9□□□□□ -1.63
VCAN-203ENST00000343200 IGHV1-3A0A0C4DH29 117 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 A0A1W2PRX2 142 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 C11orf86A6NJI1 115 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 CSRP3P50461 194 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 TMEM200BQ69YZ2 307 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 C9orf47Q6ZRZ4 202 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 DMBT1Q9UGM3 2413 aaPredicted RBP4.89□□□□□ -1.63
VCAN-203ENST00000343200 MIAQ16674 131 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 C17orf100A8MU93 164 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 LECT2O14960 151 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 LDLRAD1Q5T700 205 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 COX6B1P14854 86 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 A0A087WV48 116 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 ZNF501Q96CX3 271 aaPredicted RBP4.89□□□□□ -1.63
VCAN-203ENST00000343200 NDUFA4L2Q9NRX3 87 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 SNURFQ9Y675 71 aa4.89□□□□□ -1.63
VCAN-203ENST00000343200 IGKV2D-26A0A0A0MRZ7 120 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms