RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 HERVK_113P63121 156 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 IGHV1-69DA0A0B4J2H0 117 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 IGHV1-69P01742 117 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 FOXI1Q12951 378 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 DUX4L9Q6RFH8 374 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 EML5Q05BV3 1969 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 NMSQ5H8A3 153 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV1-6A0A0C4DH72 117 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 SPINK6Q6UWN8 80 aa12.69□□□□□ -0.38
CACNA1A-202ENST00000573710 CSRP1P21291 193 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 CARHSP1Q9Y2V2 147 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 KLK5Q9Y337 293 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 LY75O60449 1722 aa12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 C9orf118A6NHY6 69 aa12.68□□□□□ -0.38
CACNA1A-202ENST00000573710 FAM236AA0A1B0GUQ0 79 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 FAM236BA0A1B0GV22 79 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 LINC01559Q495D7 138 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 MRPL51Q4U2R6 128 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 CD59P13987 128 aa12.67□□□□□ -0.38
CACNA1A-202ENST00000573710 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 DEFB125Q8N687 156 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 GNRH2O43555 120 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 NDUFB8O95169 186 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 TRAV23DV6A0A075B6W5 121 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 ZNF491Q8N8L2 437 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 LINC00473A8K010 186 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
CACNA1A-202ENST00000573710 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 PRR15LQ9BU68 103 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 F8W1H4 67 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 DENND4CQ5VZ89 1909 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 GP9P14770 177 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 LTAP01374 205 aa12.65□□□□□ -0.38
CACNA1A-202ENST00000573710 SCXQ7RTU7 201 aa12.65□□□□□ -0.39
CACNA1A-202ENST00000573710 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.39
CACNA1A-202ENST00000573710 SLURP1P55000 103 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 ZFP36L1Q07352 338 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 MRPS18CQ9Y3D5 142 aaKnown RBP12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 RNF222A6NCQ9 220 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 COX7A2LO14548 114 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 CSPG4Q6UVK1 2322 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 NPSP0C0P6 89 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 IGLC3P0DOY3 106 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20EP86478 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20CP86479 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20DP86480 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20BP86481 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 PRR20AP86496 221 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 RHOHQ15669 191 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
CACNA1A-202ENST00000573710 SRRM5B3KS81 715 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A1B0GTI1 187 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 IGF2-ASQ6U949 168 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 B9D2Q9BPU9 175 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 ZNF134P52741 427 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 J3QQQ9 107 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 K7EP13 123 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 LY6G6FQ5SQ64 297 aa12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 KIF26AQ9ULI4 1882 aaPredicted RBP12.63□□□□□ -0.39
CACNA1A-202ENST00000573710 SLC25A29Q8N8R3 303 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A1W2PPM0 123 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 GATA3P23771 443 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 Q86TA4 180 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 PFN1P07737 140 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 GGNQ86UU5 652 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 HIGD2AQ9BW72 106 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 TMEM14BQ9NUH8 114 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 A0A1B0GW64 132 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 ZFP36P26651 326 aaKnown RBP12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 OOSP1A8MZH6 123 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 HLA-DMBP28068 263 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
CACNA1A-202ENST00000573710 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 UBE2D1P51668 147 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 WDR83OSQ9Y284 106 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 LYPD3O95274 346 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
CACNA1A-202ENST00000573710 WI2-2373I1.2A0A1W2PRP0 233 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 SPART-AS1P0CW21 52 aa12.6□□□□□ -0.39
CACNA1A-202ENST00000573710 DKK2Q9UBU2 259 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms