RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 C20orf85Q9H1P6 137 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 MGAT4CQ9UBM8 478 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 Q9UF83 564 aa7.75□□□□□ -1.17
LSM6-204ENST00000504181 MUC21A0A0G2JKD1 596 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 FAM25AB3EWG3 89 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 FAM25CB3EWG5 89 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 FAM25GB3EWG6 89 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 PYYP10082 97 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 LSM3P62310 102 aaKnown RBP7.74□□□□□ -1.17
LSM6-204ENST00000504181 NRG4Q8WWG1 115 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 CHCHD7Q9BUK0 85 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 PSENENQ9NZ42 101 aa7.74□□□□□ -1.17
LSM6-204ENST00000504181 TRBV7-9A0A0J9YWB2 115 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 DUXBA0A1W2PPF3 345 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 METTL15P1P0C7V9 234 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 SLC25A6P12236 298 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 CAV2P51636 162 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 CNBPP62633 177 aaKnown RBP7.73□□□□□ -1.17
LSM6-204ENST00000504181 C15orf54Q8N8G6 183 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 MGST2Q99735 147 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 ATP5SQ99766 215 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 SAMD10Q9BYL1 202 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 SLC39A9Q9NUM3 307 aa7.73□□□□□ -1.17
LSM6-204ENST00000504181 FNDC10F2Z333 226 aa7.72□□□□□ -1.17
LSM6-204ENST00000504181 PDE6HQ13956 83 aa7.72□□□□□ -1.17
LSM6-204ENST00000504181 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 DIRC3C9JPN6 131 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 CCSO14618 274 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 IZUMO2Q6UXV1 221 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 OR2T35Q8NGX2 323 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 PRRT1Q99946 306 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 GPN1Q9HCN4 374 aaPredicted RBP7.71□□□□□ -1.18
LSM6-204ENST00000504181 SDF2L1Q9HCN8 221 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
LSM6-204ENST00000504181 TMEM262E9PQX1 116 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 CTDSPLO15194 276 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 AKAIN1P0CW23 69 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 SMIM18P0DKX4 95 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 NEDD8Q15843 81 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 ZNF506Q5JVG8 444 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 MIC13Q5XKP0 118 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 Q6ZRG5 221 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 ZNF664Q8N3J9 261 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 STPG4Q8N801 248 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 CLRN3Q8NCR9 226 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 OR1L4Q8NGR5 311 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 TMEM14CQ9P0S9 112 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 EXTL2Q9UBQ6 330 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
LSM6-204ENST00000504181 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.69□□□□□ -1.18
LSM6-204ENST00000504181 PIGBOS1A0A0B4J2F0 54 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 IGKV2-24A0A0C4DH68 120 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 SSSCA1O60232 199 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 ANGP03950 147 aaKnown RBP7.69□□□□□ -1.18
LSM6-204ENST00000504181 SLPIP03973 132 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 TCRBP04435 133 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 HOXB5P09067 269 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 CACNG7P62955 275 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 CLVS1Q8IUQ0 354 aaPredicted RBP7.69□□□□□ -1.18
LSM6-204ENST00000504181 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
LSM6-204ENST00000504181 PRR26Q8N8Z3 221 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 TMEM75Q8N9X5 138 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 PFDN5Q99471 154 aa7.69□□□□□ -1.18
LSM6-204ENST00000504181 CAMLGP49069 296 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 FGF8P55075 233 aaPredicted RBP7.68□□□□□ -1.18
LSM6-204ENST00000504181 ARL16Q0P5N6 197 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 MIAQ16674 131 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 MPV17L2Q567V2 206 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 CLPSL2Q6UWE3 100 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 TMEM14EPQ6UXP3 125 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 C12orf45Q8N5I9 185 aaPredicted RBP7.68□□□□□ -1.18
LSM6-204ENST00000504181 ASB13Q8WXK3 278 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 KRTAP4-8Q9BYQ9 185 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
LSM6-204ENST00000504181 COX6A2Q02221 97 aa7.67□□□□□ -1.18
LSM6-204ENST00000504181 KRTAP26-1Q6PEX3 210 aa7.67□□□□□ -1.18
LSM6-204ENST00000504181 Q6ZRP5 223 aa7.67□□□□□ -1.18
LSM6-204ENST00000504181 NRARPQ7Z6K4 114 aa7.67□□□□□ -1.18
LSM6-204ENST00000504181 SCGB3A2Q96PL1 93 aa7.67□□□□□ -1.18
LSM6-204ENST00000504181 PARLQ9H300 379 aa7.67□□□□□ -1.18
LSM6-204ENST00000504181 TRAV21A0A0B4J279 112 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 RBAKDNA6NC62 111 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 F6UZH7 168 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 VAMP1P23763 118 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 SSBP1Q04837 148 aaKnown RBP7.66□□□□□ -1.18
LSM6-204ENST00000504181 OR2G3Q8NGZ4 309 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 CHAC2Q8WUX2 184 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 SMIM8Q96KF7 97 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 KCNS1Q96KK3 526 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 LINC00479Q96M42 142 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 SCP2D1Q9UJQ7 156 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 LENEPQ9Y5L5 61 aa7.66□□□□□ -1.18
LSM6-204ENST00000504181 A0A087WWL8 130 aa7.65□□□□□ -1.18
LSM6-204ENST00000504181 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
LSM6-204ENST00000504181 ID3Q02535 119 aa7.65□□□□□ -1.18
LSM6-204ENST00000504181 PRSS3P2Q8NHM4 247 aa7.65□□□□□ -1.18
LSM6-204ENST00000504181 PHYHIPLQ96FC7 376 aa7.65□□□□□ -1.18
LSM6-204ENST00000504181 NBEAP1P0C6P0 100 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms