RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 V9GYH0 126 aa10.11□□□□□ -0.79
HDAC6-236ENST00000498808 C5orf51A6NDU8 294 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 GGTLC3B5MD39 225 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 OR10J4P0C629 311 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 BCAP31P51572 246 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 FXYD5Q96DB9 178 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
HDAC6-236ENST00000498808 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
HDAC6-236ENST00000498808 NDUFB6O95139 128 aa10.09□□□□□ -0.79
HDAC6-236ENST00000498808 FGF7P21781 194 aa10.09□□□□□ -0.79
HDAC6-236ENST00000498808 RPH3ALQ9UNE2 315 aa10.09□□□□□ -0.79
HDAC6-236ENST00000498808 LSM5Q9Y4Y9 91 aaKnown RBP10.09□□□□□ -0.79
HDAC6-236ENST00000498808 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
HDAC6-236ENST00000498808 CSN1S1P47710 185 aa10.08□□□□□ -0.8
HDAC6-236ENST00000498808 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
HDAC6-236ENST00000498808 Q6ZRU5 148 aa10.08□□□□□ -0.8
HDAC6-236ENST00000498808 RMI2Q96E14 147 aa10.08□□□□□ -0.8
HDAC6-236ENST00000498808 PAXXQ9BUH6 204 aa10.08□□□□□ -0.8
HDAC6-236ENST00000498808 DIRC3C9JPN6 131 aa10.07□□□□□ -0.8
HDAC6-236ENST00000498808 CCSO14618 274 aa10.07□□□□□ -0.8
HDAC6-236ENST00000498808 CIDEAO60543 219 aa10.07□□□□□ -0.8
HDAC6-236ENST00000498808 TRAV8-1A0A0A6YYK1 113 aa10.06□□□□□ -0.8
HDAC6-236ENST00000498808 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
HDAC6-236ENST00000498808 S100A11P31949 105 aa10.06□□□□□ -0.8
HDAC6-236ENST00000498808 RANP62826 216 aaKnown RBP10.06□□□□□ -0.8
HDAC6-236ENST00000498808 MITD1Q8WV92 249 aa10.06□□□□□ -0.8
HDAC6-236ENST00000498808 NPCDR1Q9BY65 106 aa10.06□□□□□ -0.8
HDAC6-236ENST00000498808 SDF2L1Q9HCN8 221 aa10.06□□□□□ -0.8
HDAC6-236ENST00000498808 TRAV21A0A0B4J279 112 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 GAGE12JA6NER3 117 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 F6UZH7 168 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 MGST1P10620 155 aaKnown RBP10.05□□□□□ -0.8
HDAC6-236ENST00000498808 SULT1A1P50225 295 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 GAGE1Q13065 139 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 GAGE4Q13068 117 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 GAGE5Q13069 117 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 TMED6Q8WW62 240 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 ATP5SQ99766 215 aa10.05□□□□□ -0.8
HDAC6-236ENST00000498808 INPP1P49441 399 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 TMEM252Q8N6L7 170 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 UBE2WQ96B02 151 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 TVP23CQ96ET8 276 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 KCNS1Q96KK3 526 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-236ENST00000498808 Q9UF83 564 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
HDAC6-236ENST00000498808 PANO1I0J062 215 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 TMBIM6P55061 237 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 ZNF506Q5JVG8 444 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 ATRAIDQ6UW56 229 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 NIT1Q86X76 327 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 ASB13Q8WXK3 278 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
HDAC6-236ENST00000498808 MRPS26Q9BYN8 205 aaKnown RBP10.03□□□□□ -0.8
HDAC6-236ENST00000498808 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-236ENST00000498808 PGPEP1LA6NFU8 196 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 OR7C2O60412 319 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 HBG1P69891 147 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 HBG2P69892 147 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 ODF1Q14990 250 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 SPANXN2Q5MJ10 180 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 CYB561D1Q8N8Q1 229 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 C11orf21Q9P2W6 132 aa10.02□□□□□ -0.81
HDAC6-236ENST00000498808 A0A087WWC5 75 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 NAP1L6A6NFF2 107 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 FAM25EA8MYX2 175 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 H3BMQ9 156 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 BTCP35070 178 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 ATP6V1FQ16864 119 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 STX12Q86Y82 276 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 THAP6Q8TBB0 222 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 C2orf50Q96LR7 162 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 HYLS1Q96M11 299 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 URGCP-MRPS24S4R325 110 aa10.01□□□□□ -0.81
HDAC6-236ENST00000498808 SEC11BP0C7V7 166 aa10□□□□□ -0.81
HDAC6-236ENST00000498808 PVALBP20472 110 aaPredicted RBP10□□□□□ -0.81
HDAC6-236ENST00000498808 UBE2L3P68036 154 aaKnown RBP10□□□□□ -0.81
HDAC6-236ENST00000498808 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
HDAC6-236ENST00000498808 PARLQ9H300 379 aa10□□□□□ -0.81
HDAC6-236ENST00000498808 TREM1Q9NP99 234 aa10□□□□□ -0.81
HDAC6-236ENST00000498808 PTH2Q96A98 100 aa9.99□□□□□ -0.81
HDAC6-236ENST00000498808 RNASE3P12724 160 aaKnown RBP9.98□□□□□ -0.81
HDAC6-236ENST00000498808 S100A10P60903 97 aa9.98□□□□□ -0.81
HDAC6-236ENST00000498808 GOLT1AQ6ZVE7 132 aa9.98□□□□□ -0.81
HDAC6-236ENST00000498808 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
HDAC6-236ENST00000498808 TMEM75Q8N9X5 138 aa9.98□□□□□ -0.81
HDAC6-236ENST00000498808 OR2T35Q8NGX2 323 aa9.98□□□□□ -0.81
HDAC6-236ENST00000498808 LINC00479Q96M42 142 aa9.98□□□□□ -0.81
HDAC6-236ENST00000498808 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
HDAC6-236ENST00000498808 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-236ENST00000498808 IL15RAQ13261 267 aa9.97□□□□□ -0.81
HDAC6-236ENST00000498808 RAB32Q13637 225 aa9.97□□□□□ -0.81
HDAC6-236ENST00000498808 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
HDAC6-236ENST00000498808 C14orf178Q8N769 122 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms