RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 V9GYH0 126 aa9.25□□□□□ -0.93
PRPF40A-211ENST00000493468 GNRH2O43555 120 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 TYMSP04818 313 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 S100A11P31949 105 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 BCAP31P51572 246 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 CAV2P51636 162 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 CFAP126Q5VTH2 177 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 PHYHIPLQ96FC7 376 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 OR51M1Q9H341 326 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 C11orf1Q9H5F2 150 aa9.24□□□□□ -0.93
PRPF40A-211ENST00000493468 OR10J4P0C629 311 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 LINC00694P0DN24 101 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 MGST1P10620 155 aaKnown RBP9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 MITD1Q8WV92 249 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 KCNS1Q96KK3 526 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 SDF2L1Q9HCN8 221 aa9.23□□□□□ -0.93
PRPF40A-211ENST00000493468 TRAV21A0A0B4J279 112 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 C5orf51A6NDU8 294 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 FGF7P21781 194 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 SULT1A1P50225 295 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 TMBIM6P55061 237 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 HBG1P69891 147 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 HBG2P69892 147 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 ZNF876PQ49A33 203 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 MIR17HGQ75NE6 70 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 NPCDR1Q9BY65 106 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 FLVCR2Q9UPI3 526 aa9.22□□□□□ -0.93
PRPF40A-211ENST00000493468 IGKV2D-24A0A075B6R9 120 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 A0A087WWC5 75 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 NAP1L6A6NFF2 107 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 FAM24AA6NFZ4 105 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 DIRC3C9JPN6 131 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 INPP1P49441 399 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 PTH2Q96A98 100 aa9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 MRPS26Q9BYN8 205 aaKnown RBP9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 LYRM2Q9NU23 88 aaPredicted RBP9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 LSM5Q9Y4Y9 91 aaKnown RBP9.21□□□□□ -0.94
PRPF40A-211ENST00000493468 ATP6V1FQ16864 119 aa9.2□□□□□ -0.94
PRPF40A-211ENST00000493468 DPPA3Q6W0C5 159 aa9.2□□□□□ -0.94
PRPF40A-211ENST00000493468 STX12Q86Y82 276 aa9.2□□□□□ -0.94
PRPF40A-211ENST00000493468 OR10G9Q8NGN4 311 aa9.2□□□□□ -0.94
PRPF40A-211ENST00000493468 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 IGSF23A1L1A6 192 aa9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 PVALBP20472 110 aaPredicted RBP9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 RANP62826 216 aaKnown RBP9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 TMEM252Q8N6L7 170 aa9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 ASB13Q8WXK3 278 aa9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 C2orf50Q96LR7 162 aa9.19□□□□□ -0.94
PRPF40A-211ENST00000493468 SPANXN2Q5MJ10 180 aa9.18□□□□□ -0.94
PRPF40A-211ENST00000493468 NIT1Q86X76 327 aa9.18□□□□□ -0.94
PRPF40A-211ENST00000493468 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
PRPF40A-211ENST00000493468 C9orf85Q96MD7 179 aa9.18□□□□□ -0.94
PRPF40A-211ENST00000493468 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
PRPF40A-211ENST00000493468 URGCP-MRPS24S4R325 110 aa9.18□□□□□ -0.94
PRPF40A-211ENST00000493468 CCSO14618 274 aa9.17□□□□□ -0.94
PRPF40A-211ENST00000493468 OR7C2O60412 319 aa9.17□□□□□ -0.94
PRPF40A-211ENST00000493468 ASIPP42127 132 aa9.17□□□□□ -0.94
PRPF40A-211ENST00000493468 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
PRPF40A-211ENST00000493468 KCNIP2Q9NS61 270 aa9.17□□□□□ -0.94
PRPF40A-211ENST00000493468 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 H3BMQ9 156 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 UBE2L3P68036 154 aaKnown RBP9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 GAGE1Q13065 139 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 GAGE4Q13068 117 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 GAGE5Q13069 117 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 ELOBQ15370 118 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 CNPY1Q3B7I2 92 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 GAGE13Q4V321 117 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 ZNF506Q5JVG8 444 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 ARL6IP6Q8N6S5 226 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 KLK12Q9UKR0 248 aa9.16□□□□□ -0.94
PRPF40A-211ENST00000493468 A0A0D9SG52 128 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 F6UZH7 168 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 BTCP35070 178 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 Q0VG73 95 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 UBE2WQ96B02 151 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 TVP23CQ96ET8 276 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 TREM1Q9NP99 234 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 OTORQ9NRC9 128 aa9.15□□□□□ -0.94
PRPF40A-211ENST00000493468 PGPEP1LA6NFU8 196 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 FAM25EA8MYX2 175 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 NOL3O60936 208 aaKnown RBP9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 S100A5P33763 92 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 FGF8P55075 233 aaPredicted RBP9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 HSD17B11Q8NBQ5 300 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 THAP6Q8TBB0 222 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 LINC00479Q96M42 142 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 PARLQ9H300 379 aa9.14□□□□□ -0.95
PRPF40A-211ENST00000493468 A8MWV9 139 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms