RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CSN1S1P47710 185 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 TMBIM6P55061 237 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 MIR17HGQ75NE6 70 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 MITD1Q8WV92 249 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 FXYD5Q96DB9 178 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 OR51M1Q9H341 326 aa13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
PDLIM1-202ENST00000477757 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
PDLIM1-202ENST00000477757 CIDEAO60543 219 aa13.18□□□□□ -0.3
PDLIM1-202ENST00000477757 TYMSP04818 313 aa13.18□□□□□ -0.3
PDLIM1-202ENST00000477757 C5orf51A6NDU8 294 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 GGTLC3B5MD39 225 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 OR10J4P0C629 311 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 S100A11P31949 105 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 SULT1A1P50225 295 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 TMED6Q8WW62 240 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 RMI2Q96E14 147 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 NPCDR1Q9BY65 106 aa13.17□□□□□ -0.3
PDLIM1-202ENST00000477757 CCSO14618 274 aa13.16□□□□□ -0.3
PDLIM1-202ENST00000477757 HBG1P69891 147 aa13.16□□□□□ -0.3
PDLIM1-202ENST00000477757 HBG2P69892 147 aa13.16□□□□□ -0.3
PDLIM1-202ENST00000477757 ATP5SQ99766 215 aa13.16□□□□□ -0.3
PDLIM1-202ENST00000477757 PAXXQ9BUH6 204 aa13.16□□□□□ -0.3
PDLIM1-202ENST00000477757 SH3BGRL3Q9H299 93 aa13.16□□□□□ -0.3
PDLIM1-202ENST00000477757 IGSF23A1L1A6 192 aa13.15□□□□□ -0.3
PDLIM1-202ENST00000477757 NAP1L6A6NFF2 107 aa13.15□□□□□ -0.3
PDLIM1-202ENST00000477757 ZNF876PQ49A33 203 aa13.15□□□□□ -0.3
PDLIM1-202ENST00000477757 SDF2L1Q9HCN8 221 aa13.15□□□□□ -0.3
PDLIM1-202ENST00000477757 LYRM2Q9NU23 88 aaPredicted RBP13.15□□□□□ -0.3
PDLIM1-202ENST00000477757 IGHV3-73A0A0B4J1V6 119 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 TRAV21A0A0B4J279 112 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 DIRC3C9JPN6 131 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 H3BMQ9 156 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 LINC00694P0DN24 101 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 MGST1P10620 155 aaKnown RBP13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 RANP62826 216 aaKnown RBP13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 DPPA3Q6W0C5 159 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 STX12Q86Y82 276 aa13.14□□□□□ -0.31
PDLIM1-202ENST00000477757 IGKV2D-24A0A075B6R9 120 aa13.13□□□□□ -0.31
PDLIM1-202ENST00000477757 TRAV8-1A0A0A6YYK1 113 aa13.13□□□□□ -0.31
PDLIM1-202ENST00000477757 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
PDLIM1-202ENST00000477757 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
PDLIM1-202ENST00000477757 ATP6V1FQ16864 119 aa13.12□□□□□ -0.31
PDLIM1-202ENST00000477757 TMEM252Q8N6L7 170 aa13.12□□□□□ -0.31
PDLIM1-202ENST00000477757 DNAJC30Q96LL9 226 aa13.12□□□□□ -0.31
PDLIM1-202ENST00000477757 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
PDLIM1-202ENST00000477757 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
PDLIM1-202ENST00000477757 ASB13Q8WXK3 278 aa13.11□□□□□ -0.31
PDLIM1-202ENST00000477757 FAM25EA8MYX2 175 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 F6UZH7 168 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 OR7C2O60412 319 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 BTCP35070 178 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 INPP1P49441 399 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 UBE2L3P68036 154 aaKnown RBP13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 Q6ZRU5 148 aa13.1□□□□□ -0.31
PDLIM1-202ENST00000477757 A0A087WWC5 75 aa13.09□□□□□ -0.31
PDLIM1-202ENST00000477757 SEC11BP0C7V7 166 aa13.09□□□□□ -0.31
PDLIM1-202ENST00000477757 THAP6Q8TBB0 222 aa13.09□□□□□ -0.31
PDLIM1-202ENST00000477757 S100A5P33763 92 aa13.08□□□□□ -0.32
PDLIM1-202ENST00000477757 S100A10P60903 97 aa13.08□□□□□ -0.32
PDLIM1-202ENST00000477757 CYB561D1Q8N8Q1 229 aa13.08□□□□□ -0.32
PDLIM1-202ENST00000477757 GAGE12JA6NER3 117 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 GAGE1Q13065 139 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 GAGE4Q13068 117 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 GAGE5Q13069 117 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 GAGE13Q4V321 117 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 ZNF506Q5JVG8 444 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 TRIQKQ629K1 86 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 ATRAIDQ6UW56 229 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 PTH2Q96A98 100 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 TVP23CQ96ET8 276 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 C9orf85Q96MD7 179 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 URGCP-MRPS24S4R325 110 aa13.07□□□□□ -0.32
PDLIM1-202ENST00000477757 NIT1Q86X76 327 aa13.06□□□□□ -0.32
PDLIM1-202ENST00000477757 C2orf50Q96LR7 162 aa13.06□□□□□ -0.32
PDLIM1-202ENST00000477757 HYLS1Q96M11 299 aa13.06□□□□□ -0.32
PDLIM1-202ENST00000477757 TREM1Q9NP99 234 aa13.06□□□□□ -0.32
PDLIM1-202ENST00000477757 UBE2WQ96B02 151 aa13.05□□□□□ -0.32
PDLIM1-202ENST00000477757 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
PDLIM1-202ENST00000477757 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 ASIPP42127 132 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 GOLT1AQ6ZVE7 132 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 OR10G9Q8NGN4 311 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 OTORQ9NRC9 128 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 C11orf21Q9P2W6 132 aa13.04□□□□□ -0.32
PDLIM1-202ENST00000477757 IL15RAQ13261 267 aa13.03□□□□□ -0.32
PDLIM1-202ENST00000477757 RAB32Q13637 225 aa13.03□□□□□ -0.32
PDLIM1-202ENST00000477757 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
PDLIM1-202ENST00000477757 ZFP2Q6ZN57 461 aa13.03□□□□□ -0.32
PDLIM1-202ENST00000477757 PARLQ9H300 379 aa13.03□□□□□ -0.32
PDLIM1-202ENST00000477757 CENPXA8MT69 81 aa13.02□□□□□ -0.33
PDLIM1-202ENST00000477757 KHDC3LQ587J8 217 aa13.02□□□□□ -0.33
PDLIM1-202ENST00000477757 OR5C1Q8NGR4 320 aa13.02□□□□□ -0.33
PDLIM1-202ENST00000477757 CHCHD7Q9BUK0 85 aa13.02□□□□□ -0.33
PDLIM1-202ENST00000477757 NMES1Q9C002 83 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms