RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ARL16Q0P5N6 197 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 CNPY1Q3B7I2 92 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 Q6ZRU5 148 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 HSD17B11Q8NBQ5 300 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 SMIM8Q96KF7 97 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 OR51M1Q9H341 326 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 ZNF492Q9P255 531 aa4.46□□□□□ -1.7
HDAC1-204ENST00000471488 UBE2L5PA0A1B0GUS4 154 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 K7EPK0 472 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 ZNF253O75346 499 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 NMBP08949 121 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 CAV2P51636 162 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 ID3Q02535 119 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 ZNF876PQ49A33 203 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 TMEM14EPQ6UXP3 125 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 ZC2HC1AQ96GY0 325 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 C2orf50Q96LR7 162 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 HYLS1Q96M11 299 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 ATP5SQ99766 215 aa4.45□□□□□ -1.7
HDAC1-204ENST00000471488 A0A087WX48 190 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 FNDC10F2Z333 226 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 F6UZH7 168 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 CST7O76096 145 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 FGF7P21781 194 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 IAH1Q2TAA2 248 aaPredicted RBP4.44□□□□□ -1.7
HDAC1-204ENST00000471488 TOMM5Q8N4H5 51 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 OR2T35Q8NGX2 323 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 DYNC2LI1Q8TCX1 351 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 C20orf85Q9H1P6 137 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 SDF2L1Q9HCN8 221 aa4.44□□□□□ -1.7
HDAC1-204ENST00000471488 LSM5Q9Y4Y9 91 aaKnown RBP4.44□□□□□ -1.7
HDAC1-204ENST00000471488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
HDAC1-204ENST00000471488 PGPA6NDG6 321 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 TMEM262E9PQX1 116 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 CRPP02741 224 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 TYMSP04818 313 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 NBEAP1P0C6P0 100 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 SEC11BP0C7V7 166 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 AP3S2P59780 193 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 SSTP61278 116 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 RANP62826 216 aaKnown RBP4.43□□□□□ -1.7
HDAC1-204ENST00000471488 S100A12P80511 92 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 PDE6HQ13956 83 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 ZNF266Q14584 549 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 PYDC2Q56P42 97 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 GCSAMLQ5JQS6 135 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 CFAP126Q5VTH2 177 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 ASB13Q8WXK3 278 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 PHYHIPLQ96FC7 376 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 PAXXQ9BUH6 204 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 C1orf43Q9BWL3 253 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 NMES1Q9C002 83 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 SH3BGRL3Q9H299 93 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 UQCC1Q9NVA1 299 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 MBD2Q9UBB5 411 aa4.43□□□□□ -1.7
HDAC1-204ENST00000471488 RSL24D1Q9UHA3 163 aaKnown RBP4.43□□□□□ -1.7
HDAC1-204ENST00000471488 TRBV6-4A0A1B0GX49 114 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 C9orf170A2RU37 121 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 C7orf66A4D0T2 115 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 USP17L23D6RBM5 183 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 PANO1I0J062 215 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 CTDSPLO15194 276 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 OR7C2O60412 319 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 MGST1P10620 155 aaKnown RBP4.42□□□□□ -1.7
HDAC1-204ENST00000471488 DPPA3Q6W0C5 159 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 MIR17HGQ75NE6 70 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 BCL7BQ9BQE9 202 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 GGACTQ9BVM4 153 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 SLC25A2Q9BXI2 301 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 TMEM14CQ9P0S9 112 aa4.42□□□□□ -1.7
HDAC1-204ENST00000471488 TNXBP22105 4242 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 A0A087WWC5 75 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 TRAV21A0A0B4J279 112 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 FAM24AA6NFZ4 105 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 CCSO14618 274 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 INPP1P49441 399 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 S100A10P60903 97 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 ELOBQ15370 118 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 CTF1Q16619 201 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 LGALSLQ3ZCW2 172 aaPredicted RBP4.41□□□□□ -1.7
HDAC1-204ENST00000471488 DMRTA1Q5VZB9 504 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 Q6AWC8 147 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 NIT1Q86X76 327 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 C15orf54Q8N8G6 183 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 CYB561D1Q8N8Q1 229 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 CMTM2Q8TAZ6 248 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 GTSF1Q8WW33 167 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 SGK494Q96LW2 274 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 SLC25A21Q9BQT8 299 aaPredicted RBP4.41□□□□□ -1.7
HDAC1-204ENST00000471488 SAMD10Q9BYL1 202 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 TREM1Q9NP99 234 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 WDR83OSQ9Y284 106 aa4.41□□□□□ -1.7
HDAC1-204ENST00000471488 PGPEP1LA6NFU8 196 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 DIRC3C9JPN6 131 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 PHOX2AO14813 284 aa4.4□□□□□ -1.71
HDAC1-204ENST00000471488 MBPP02686 304 aaPredicted RBP4.4□□□□□ -1.71
HDAC1-204ENST00000471488 ANGP03950 147 aaKnown RBP4.4□□□□□ -1.71
HDAC1-204ENST00000471488 PRSS1P07477 247 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms