RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 NPVFQ9HCQ7 196 aa2.04□□□□□ -2.08
VPS8-215ENST00000460158 PLXNA1Q9UIW2 1896 aa2.04□□□□□ -2.08
VPS8-215ENST00000460158 MUC4Q99102 2169 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 KNDC1Q76NI1 1749 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 PPRC1Q5VV67 1664 aaKnown RBP2.03□□□□□ -2.08
VPS8-215ENST00000460158 POLA1P09884 1462 aaPredicted RBP2.03□□□□□ -2.08
VPS8-215ENST00000460158 ERVK-7P63135 1459 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 IGLV4-69A0A075B6H9 119 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 TRAV3A0A0B4J244 114 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 UBE2L5PA0A1B0GUS4 154 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 K7EP34 96 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 GNGT2O14610 69 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 GNRH2O43555 120 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 PROSCO94903 275 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 UBL3O95164 117 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 APOC3P02656 99 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 ASIPP42127 132 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 POLR2JP52435 117 aaKnown RBP2.03□□□□□ -2.08
VPS8-215ENST00000460158 UBE2L3P68036 154 aaKnown RBP2.03□□□□□ -2.08
VPS8-215ENST00000460158 FOXF1Q12946 379 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 UNQ5815/PRO19632Q6UWF5 114 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 IGFL3Q6UXB1 125 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 Q6ZS52 159 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 LINC00301Q8NCQ3 95 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 Q8NDZ9 215 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 Q96M85 177 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 PMCHL2Q9BQD1 86 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 ARHGAP32A7KAX9 2087 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 MICAL3Q7RTP6 2002 aa2.03□□□□□ -2.08
VPS8-215ENST00000460158 MGAMO43451 1857 aa2.03□□□□□ -2.09
VPS8-215ENST00000460158 PEAK1Q9H792 1746 aa2.03□□□□□ -2.09
VPS8-215ENST00000460158 TNS1Q9HBL0 1735 aaKnown RBP2.03□□□□□ -2.09
VPS8-215ENST00000460158 NWD2Q9ULI1 1742 aa2.03□□□□□ -2.09
VPS8-215ENST00000460158 TET3O43151 1660 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 LAMC3Q9Y6N6 1575 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 RBAKDNA6NC62 111 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 C11orf86A6NJI1 115 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 A6NN06 94 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 F8W1H4 67 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 CRPP02741 224 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 MGST1P10620 155 aaKnown RBP2.02□□□□□ -2.09
VPS8-215ENST00000460158 DEFA4P12838 97 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 DEFA5Q01523 94 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 ALKAL2Q6UX46 152 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 HMGN2P46Q86SG4 172 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 SLC50A1Q9BRV3 221 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 C14orf132Q9NPU4 83 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 UQCR10Q9UDW1 63 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 FAM215AQ9Y5M1 114 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 PDCD11Q14690 1871 aaKnown RBP2.02□□□□□ -2.09
VPS8-215ENST00000460158 STRCQ7RTU9 1775 aa2.02□□□□□ -2.09
VPS8-215ENST00000460158 CLTCQ00610 1675 aaKnown RBP2.02□□□□□ -2.09
VPS8-215ENST00000460158 ARHGEF12Q9NZN5 1544 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 EEA1Q15075 1411 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 PRR14LQ5THK1 2151 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 IGKV2D-26A0A0A0MRZ7 120 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 E7EQL1 145 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 PIRTP0C851 137 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 ZNF22P17026 224 aaPredicted RBP2.01□□□□□ -2.09
VPS8-215ENST00000460158 COL8A2P25067 703 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 SPRNQ5BIV9 151 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 SPANXN5Q5MJ07 72 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 SPANXN1Q5VSR9 72 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 Q5W150 140 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 FP248Q71RG6 208 aaPredicted RBP2.01□□□□□ -2.09
VPS8-215ENST00000460158 C5orf38Q86SI9 138 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 SBSPONQ8IVN8 264 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 Q8IYB0 196 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 Q8N814 137 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 MUCL1Q96DR8 90 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 DPH3P1Q9H4G8 78 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 SMCO4Q9NRQ5 59 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 MYO16Q9Y6X6 1858 aa2.01□□□□□ -2.09
VPS8-215ENST00000460158 C10orf71Q711Q0 1435 aa2□□□□□ -2.09
VPS8-215ENST00000460158 MAP3K4Q9Y6R4 1608 aa2□□□□□ -2.09
VPS8-215ENST00000460158 IGKV1D-42A0A075B6H8 117 aa2□□□□□ -2.09
VPS8-215ENST00000460158 IGKV2D-24A0A075B6R9 120 aa2□□□□□ -2.09
VPS8-215ENST00000460158 TRAV14DV4A0A0A6YYC5 116 aa2□□□□□ -2.09
VPS8-215ENST00000460158 IGHV1-18A0A0C4DH31 117 aa2□□□□□ -2.09
VPS8-215ENST00000460158 MRPS14O60783 128 aaKnown RBP2□□□□□ -2.09
VPS8-215ENST00000460158 SFT2D2O95562 160 aa2□□□□□ -2.09
VPS8-215ENST00000460158 IGLV1-51P01701 117 aa2□□□□□ -2.09
VPS8-215ENST00000460158 CLPSP04118 112 aa2□□□□□ -2.09
VPS8-215ENST00000460158 NMBP08949 121 aa2□□□□□ -2.09
VPS8-215ENST00000460158 SLC25A6P12236 298 aa2□□□□□ -2.09
VPS8-215ENST00000460158 LINC00315P59091 139 aa2□□□□□ -2.09
VPS8-215ENST00000460158 KRTDAPP60985 99 aa2□□□□□ -2.09
VPS8-215ENST00000460158 ZNF816Q0VGE8 651 aaPredicted RBP2□□□□□ -2.09
VPS8-215ENST00000460158 INSL4Q14641 139 aa2□□□□□ -2.09
VPS8-215ENST00000460158 NNATQ16517 81 aa2□□□□□ -2.09
VPS8-215ENST00000460158 S100A7L2Q5SY68 101 aa2□□□□□ -2.09
VPS8-215ENST00000460158 RPL7L1Q6DKI1 246 aaKnown RBP2□□□□□ -2.09
VPS8-215ENST00000460158 CASC2Q6XLA1 102 aa2□□□□□ -2.09
VPS8-215ENST00000460158 Q6ZQT0 140 aa2□□□□□ -2.09
VPS8-215ENST00000460158 LINC00299Q6ZSB3 139 aa2□□□□□ -2.09
VPS8-215ENST00000460158 SLC25A26Q70HW3 274 aa2□□□□□ -2.09
VPS8-215ENST00000460158 Q8N8P6 123 aa2□□□□□ -2.09
VPS8-215ENST00000460158 C15orf53Q8NAA6 179 aa2□□□□□ -2.09
VPS8-215ENST00000460158 UBALD1Q8TB05 177 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms