RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SDIM1Q6ZPB5 146 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 ASCL5Q7RTU5 278 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 RNF182Q8N6D2 247 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 NRACQ8N912 160 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 PROK2Q9HC23 129 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 C2orf16Q68DN1 1984 aa4.33□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGKV1D-17A0A075B6S4 117 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 hADV29S1A0JD25 119 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 NTN3O00634 580 aaPredicted RBP4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 TRIAP1O43715 76 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGHG2P01859 326 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGKV1-16P04430 117 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 CRIP1P50238 77 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 C17orf58Q2M2W7 97 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 Q6JHZ5 121 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 RNF186Q9NXI6 227 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 RNF7Q9UBF6 113 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 HCFC1P51610 2035 aa4.32□□□□□ -1.72
VTI1BP4-201ENST00000427516 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGHV1OR15-9A0A0B4J2B8 117 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 A0A1W2PR77 199 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 TMEM223A0PJW6 202 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 KNCNA6PVL3 124 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 VCYO14598 125 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 PFN2P35080 140 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 LINC00205P59089 165 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 KLRB1Q12918 225 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 RHOHQ15669 191 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 MLANAQ16655 118 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 ASPHD1Q5U4P2 390 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 C8orf49Q96NF6 230 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 PLA2G2FQ9BZM2 168 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 SIT1Q9Y3P8 196 aa4.31□□□□□ -1.72
VTI1BP4-201ENST00000427516 TET1Q8NFU7 2136 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 MBD3L4A6NDZ8 208 aaPredicted RBP4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 MBD3L3A6NE82 208 aaPredicted RBP4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 MBD3L5A6NJ08 208 aaPredicted RBP4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 H7C2G1 150 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 J3QLI3 93 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGKV3-15P01624 115 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 PF4P02776 101 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 MIAQ16674 131 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF826PQ6ZT77 177 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 Q6ZT83 130 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 CXorf67Q86X51 503 aaPredicted RBP4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 PYGO1Q9Y3Y4 419 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 PTPRBP23467 1997 aa4.3□□□□□ -1.72
VTI1BP4-201ENST00000427516 ADAMTS20P59510 1910 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 RBMY1BA6NDE4 496 aaKnown RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 RBMY1EA6NEQ0 496 aaKnown RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 H3BTX0 84 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 I3L2K1 104 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 COX7A2LO14548 114 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 RBMY1DP0C7P1 496 aaKnown RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 RBMY1CP0DJD4 496 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 S100A4P26447 101 aaKnown RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 RBMY1FQ15415 496 aaKnown RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF876PQ49A33 203 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 C1orf195Q5TG92 126 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 FAM53AQ6NSI3 398 aaPredicted RBP4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 MUSTN1Q8IVN3 82 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNF491Q8N8L2 437 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 DCANP1Q8TF63 244 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 A0A087WW49 117 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TRAV8-3A0A0A6YYJ7 113 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TRAV21A0A0B4J279 112 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 LHBP01229 141 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 IGLV2-23P01705 113 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 CRIP2P52943 208 aaPredicted RBP4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 C6orf226Q5I0X4 101 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 HCP5Q6MZN7 132 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TMEM61Q8N0U2 210 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 ZNRF1Q8ND25 227 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 MAFAQ8NHW3 353 aaPredicted RBP4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 BEX4Q9NWD9 120 aaPredicted RBP4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TP53TG1Q9Y2A0 90 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 PHLDA3Q9Y5J5 127 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 SLC25A15Q9Y619 301 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 DYSFO75923 2080 aa4.28□□□□□ -1.72
VTI1BP4-201ENST00000427516 TET2Q6N021 2002 aaPredicted RBP4.28□□□□□ -1.73
VTI1BP4-201ENST00000427516 USF3Q68DE3 2245 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms