RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SYNJ2BPP57105 145 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
SMAD4-202ENST00000398417 SPATA12Q7Z6I5 190 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 MBD6Q96DN6 1003 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 J3QQQ9 107 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 ATP5G2Q06055 141 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 GTSF1Q8WW33 167 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 C7orf71A4D174 169 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 C1RLQ9NZP8 487 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 KLF5Q13887 457 aaPredicted RBP3.89□□□□□ -1.79
SMAD4-202ENST00000398417 OR5A1Q8NGJ0 315 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 ADAMTS20P59510 1910 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM75Q8N9X5 138 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM254Q8TBM7 123 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 CHCHD1Q96BP2 118 aaKnown RBP3.88□□□□□ -1.79
SMAD4-202ENST00000398417 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 RHOGP84095 191 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 LOXL1Q08397 574 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-202ENST00000398417 C5orf64Q2M2E5 130 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 SS18L2Q9UHA2 77 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 VWC2LB2RUY7 222 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 G3V318 75 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 NPYP01303 97 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 IGLV1-47P01700 117 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 UBE2DNLQ8IWF7 75 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 RNF182Q8N6D2 247 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 SPANXDQ9BXN6 97 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 GNLYP22749 145 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 NDPQ00604 133 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 Q8N976 141 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 GTSF1LQ9H1H1 148 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 TSPOP30536 169 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 IFI27P40305 119 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-202ENST00000398417 BRD3OSQ6XYD6 125 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 ITLN2Q8WWU7 325 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-202ENST00000398417 SCGB3A1Q96QR1 104 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 GEMIN7Q9H840 131 aaKnown RBP3.88□□□□□ -1.79
SMAD4-202ENST00000398417 TTC28Q96AY4 2481 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM78Q5T7P6 136 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 HIST2H2BCQ6DN03 193 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 LINC00574Q9H8X3 128 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 KAAG1Q9UBP8 84 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 A0A087X0K7 114 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 K7ENP7 123 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM219Q86XT9 240 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 WIPF2Q8TF74 440 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-202ENST00000398417 VGLL1Q99990 258 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 MSRB1Q9NZV6 116 aa3.88□□□□□ -1.79
SMAD4-202ENST00000398417 PRAC2D3DTV9 90 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 TNFRSF13BO14836 293 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-202ENST00000398417 CRYGBP07316 175 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 RPS20P60866 119 aaKnown RBP3.87□□□□□ -1.79
SMAD4-202ENST00000398417 C8orf31Q8N9H6 132 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 URB1-AS1Q96HZ7 61 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 K7EIM0 57 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 TRGV3P03979 118 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 MYCNOSP40205 109 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 GAGE2BQ13066 116 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 MRGPRG-AS1Q2M3A8 158 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 INS-IGF2F8WCM5 200 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 H3BUT2 72 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 IGHV4-39P01824 125 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 GATA1P15976 413 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-202ENST00000398417 FAM106AQ4KMX7 169 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 MUC6Q6W4X9 2439 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 H3BRM9 83 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 ATP6V0E1O15342 81 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 IGKV1-17P01599 117 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM14CQ9P0S9 112 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 COL5A1P20908 1838 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-202ENST00000398417 C19orf71A6NCJ1 209 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 TMEM170BQ5T4T1 132 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 RNASE8Q8TDE3 154 aaKnown RBP3.87□□□□□ -1.79
SMAD4-202ENST00000398417 GFRA4Q9GZZ7 299 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 SPTBN4Q9H254 2564 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 WI2-2373I1.2A0A1W2PRP0 233 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 PAX1P15863 534 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 NSUN5P1Q3KNT7 163 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 C8orf86Q6ZUL3 223 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 GTSCR1Q86UQ5 136 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 OR9G4Q8NGQ1 327 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 FAM110DQ8TAY7 271 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-202ENST00000398417 CFHR4Q92496 578 aa3.87□□□□□ -1.79
SMAD4-202ENST00000398417 FABP5P3A8MUU1 101 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 RNASE4P34096 147 aaKnown RBP3.86□□□□□ -1.79
SMAD4-202ENST00000398417 ADORA2A-AS1P86434 159 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 TOMM7Q9P0U1 55 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 TCTEX1D4Q5JR98 221 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 IGF2-ASQ6U949 168 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 MRPL16Q9NX20 251 aaKnown RBP3.86□□□□□ -1.79
SMAD4-202ENST00000398417 NPC2P61916 151 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 HIST1H1AQ02539 215 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-202ENST00000398417 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
SMAD4-202ENST00000398417 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 CRYBG3Q68DQ2 2970 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 TIMM17AQ99595 171 aa3.86□□□□□ -1.79
SMAD4-202ENST00000398417 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms