RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 HLA-DRB4X5D2U9 266 aa2.66□□□□□ -1.98
HMGB3P23-201ENST00000414981 KMT2EQ8IZD2 1858 aa2.66□□□□□ -1.98
HMGB3P23-201ENST00000414981 ABCA7Q8IZY2 2146 aa2.65□□□□□ -1.98
HMGB3P23-201ENST00000414981 CHD3Q12873 2000 aaKnown RBP2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGHV3-15A0A0B4J1V0 119 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 A0A0U1RQV1 116 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 A0A1B0GX51 115 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 FAM168BA1KXE4 195 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 F8W1H4 67 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 PEX7O00628 323 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGHV3-9P01782 118 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 COX6A1P12074 109 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 NTF3P20783 257 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 PRTN3P24158 256 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 PFN2P35080 140 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 MFAP2P55001 183 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 RPL30P62888 115 aaKnown RBP2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 CACNG7P62955 275 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 PRCDQ00LT1 54 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF816Q0VGE8 651 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 LGALS9BQ3B8N2 356 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 Q56UQ5 140 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 FAM201AQ5SY85 155 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 MIC13Q5XKP0 118 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 AMMECR1LQ6DCA0 310 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 LGALS9CQ6DKI2 356 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 FOXI2Q6ZQN5 318 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 GOLT1AQ6ZVE7 132 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 BPIFA4PQ86YQ2 179 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 RPRMLQ8N4K4 120 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 NUP35Q8NFH5 326 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 TSTD1Q8NFU3 115 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 OR9G1Q8NH87 305 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 RFESDQ8TAC1 157 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 VSTM2AQ8TAG5 236 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 NABP2Q9BQ15 211 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 TMEM126AQ9H061 195 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 HIGD1BQ9P298 99 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 ERG28Q9UKR5 140 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF835Q9Y2P0 537 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 KIAA1549Q9HCM3 1950 aa2.65□□□□□ -1.99
HMGB3P23-201ENST00000414981 GOLGB1Q14789 3259 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 DNAH12Q6ZR08 3092 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 LOC102724200A0A096LPH7 203 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 TRAV8-4A0A0B4J246 113 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGHV1-24A0A0C4DH33 117 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 MUC21A0A0G2JKD1 596 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 A0A0G2JMM0 328 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGHV5-10-1A0A0J9YXX1 117 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 MUC21A0A140T8X8 626 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 TEX50A0A1B0GTY4 177 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 A0A1W2PPB8 328 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 hADV38S2A0JD32 116 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 C19orf71A6NCJ1 209 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 RBMY1BA6NDE4 496 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 RBMY1EA6NEQ0 496 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 OR2T8A6NH00 312 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 HIGD1CA8MV81 97 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 KIR3DP1A8MWS1 328 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 GGTLC3B5MD39 225 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 F2Z2F3 143 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 J3KT08 172 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 KLF7O75840 302 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 LTAP01374 205 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 P01737 135 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 ATP5G1P05496 136 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 RBMY1DP0C7P1 496 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 RBMY1A1P0DJD3 496 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 FABP2P12104 132 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 GPR6P46095 362 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 LYZP61626 148 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 ERHP84090 104 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 PMVKQ15126 192 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 ACP7Q6ZNF0 438 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF493Q6ZR52 646 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 SHISA6Q6ZSJ9 500 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 SSX8Q7RTT4 187 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 LYPD1Q8N2G4 141 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 EXOC3-AS1Q8N2X6 119 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 FAM19A2Q8N3H0 131 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 SLC25A45Q8N413 288 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 C5orf17Q8NAS9 161 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 TMEM101Q96IK0 257 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 FAM167A-AS1Q96KT0 104 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 RPP21Q9H633 154 aaKnown RBP2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 CALYQ9NYX4 217 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 EPDR1Q9UM22 224 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 ZNF318Q5VUA4 2279 aa2.64□□□□□ -1.99
HMGB3P23-201ENST00000414981 F5P12259 2224 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 SPAG17Q6Q759 2223 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 TRAV8-6A0A0B4J262 113 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 A0A1W2PPM0 123 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 LINC01546A6NGU7 62 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 K7ENP7 123 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 UPK2O00526 184 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 IGHG2P01859 326 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 CGB3P0DN86 165 aa2.63□□□□□ -1.99
HMGB3P23-201ENST00000414981 CGB7P0DN87 165 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms