RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 Q6ZR03 302 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 C20orf78Q9BR46 151 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 RBAKDNA6NC62 111 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 C15orf65H3BRN8 121 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 ELANEP08246 267 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 C5orf24Q7Z6I8 188 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 RNF152Q8N8N0 203 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 UBE2WQ96B02 151 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 SELENOKQ9Y6D0 94 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 F8W1H4 67 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 PYGO2Q9BRQ0 406 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 PRR14LQ5THK1 2151 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF664Q8N3J9 261 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 ZNRD1Q9P1U0 126 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 IGHV1-24A0A0C4DH33 117 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 TRAV13-2A0A0B4J235 113 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 F8VRH5 84 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 IGLV3-1P01715 115 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 HLA-DRB4P13762 266 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF48Q96MX3 618 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-204ENST00000395898 HLA-DRB4X5D2U9 266 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 WDR86Q86TI4 376 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF114Q8NC26 417 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 PRB4P10163 310 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-204ENST00000395898 CYYR1Q96J86 154 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 LY6G6EA0A0G2JKS1 128 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 POU2AF1Q16633 256 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 CR1LQ2VPA4 569 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 DEFB104AQ8WTQ1 72 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 U3KQA8 63 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 V9GYV3 84 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 LOXP28300 417 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-204ENST00000395898 VOPP1Q96AW1 172 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 MRPL53Q96EL3 112 aaKnown RBP4.34□□□□□ -1.71
VPS13C-204ENST00000395898 G3V318 75 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 ADCYAP1P18509 176 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 WT1-ASQ06250 92 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
VPS13C-204ENST00000395898 PRR30Q53SZ7 412 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-204ENST00000395898 SUMO4Q6EEV6 95 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 STPG4Q8N801 248 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 ZNRF2Q8NHG8 242 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 FOXI2Q6ZQN5 318 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 TMEM126AQ9H061 195 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 VPREB3Q9UKI3 123 aa4.34□□□□□ -1.71
VPS13C-204ENST00000395898 NBL1P41271 181 aa4.34□□□□□ -1.72
VPS13C-204ENST00000395898 DSCAML1Q8TD84 2053 aa4.34□□□□□ -1.72
VPS13C-204ENST00000395898 IGHV2-5P01817 119 aa4.34□□□□□ -1.72
VPS13C-204ENST00000395898 Q8NFD4 153 aa4.34□□□□□ -1.72
VPS13C-204ENST00000395898 C1orf147Q96MC9 270 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-204ENST00000395898 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.72
VPS13C-204ENST00000395898 FXYD5Q96DB9 178 aa4.34□□□□□ -1.72
VPS13C-204ENST00000395898 MMP23AO75900 390 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 VWC2Q2TAL6 325 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 IGF2-ASQ6U949 168 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 ZNF493Q6ZR52 646 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 TMEM213A2RRL7 107 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 COX8AP10176 69 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 PIP4P1Q86T03 277 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 PRO1854Q9UHT4 67 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE1Q13065 139 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE4Q13068 117 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE5Q13069 117 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 C10orf91Q5T1B1 145 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 TEX48A0A1B0GUV7 120 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 J3QKU1 62 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 SIVA1O15304 175 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 ANXA2RQ3ZCQ2 193 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 C20orf144Q9BQM9 153 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 RHOHQ15669 191 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 ZNF491Q8N8L2 437 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 KLK9Q9UKQ9 250 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 CCL24O00175 119 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 LHBP01229 141 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 FGF6P10767 208 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 PFN2P35080 140 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 PTPRQQ9UMZ3 2332 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 TRAV12-2A0A075B6T6 113 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 ANGP03950 147 aaKnown RBP4.33□□□□□ -1.72
VPS13C-204ENST00000395898 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 PRSS57Q6UWY2 283 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 CEND1Q8N111 149 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 ATG2AQ2TAZ0 1938 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 CREBBPQ92793 2442 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 C9orf118A6NHY6 69 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 IGHV2-70P01814 119 aa4.33□□□□□ -1.72
VPS13C-204ENST00000395898 HOXB4P17483 251 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-204ENST00000395898 HLA-DMBP28068 263 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-204ENST00000395898 SMIM2Q9BVW6 85 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 IGHV3-16A0A0C4DH30 117 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 CFHR3Q02985 330 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE7O76087 117 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
VPS13C-204ENST00000395898 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms