RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HHLA2Q9UM44 414 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ATMQ13315 3056 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 NAV1Q8NEY1 1877 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 A0A087WUU8 490 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV8-1A0A0A6YYK1 113 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SPRR5A0A1B0GTR4 108 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM269A0A1B0GVZ9 245 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 LINC00587B1AMM8 73 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 H3BQ85 93 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 GEMIN2O14893 280 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SPINK4O60575 86 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF324O75467 553 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR7C1O76099 320 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 NDUFB2O95178 105 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 IGLV3-27P01718 113 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SLC25A5P05141 298 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PFN1P07737 140 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CD14P08571 375 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SLC25A4P12235 298 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SURF2Q15527 256 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 MMDQ15546 238 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PMCHL1Q16048 86 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SPATA45Q537H7 98 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 Q56UQ5 140 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PABPC1L2AQ5JQF8 200 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 FAM78BQ5VT40 261 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 AMMECR1LQ6DCA0 310 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF322Q6U7Q0 402 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 HMGN2P46Q86SG4 172 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 LYG2Q86SG7 212 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR8I2Q8N0Y5 310 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZFAND2AQ8N6M9 145 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 Q8N9L7 120 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR51A2Q8NGJ7 313 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR4C16Q8NGL9 310 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PPP1R1CQ8WVI7 109 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 C2orf50Q96LR7 162 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 GGACTQ9BVM4 153 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 RSPO3Q9BXY4 272 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 C11orf68Q9H3H3 251 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CBLN4Q9NTU7 201 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF391Q9UJN7 358 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR52A1Q9UKL2 312 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZFP30Q9Y2G7 519 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 EDC4Q6P2E9 1401 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 MICAL3Q7RTP6 2002 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 A0A0J9YY10 115 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 A0A1B0GX78 115 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR51F1A6NGY5 319 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 HMSDA8MTL9 139 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 MCRIP1C9JLW8 97 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM262E9PQX1 116 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TRAPPC2LH3BP13 241 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 RPL36A-HNRNPH2H7BZ11 118 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 H7C1C5 153 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 S1PR2O95136 353 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 IGHG2P01859 326 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SMIM13P0DJ93 91 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF22P17026 224 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 IL1RNP18510 177 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 BLVRBP30043 206 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 BRS3P32247 399 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CCR2P41597 374 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 EVX1P49640 407 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF140P52738 457 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TSPEAR-AS2P59090 65 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TNFAIP6P98066 277 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SPANXN5Q5MJ07 72 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF660Q6AZW8 331 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 AGTRAPQ6RW13 159 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 C16orf47Q6ZP98 133 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SSX8Q7RTT4 187 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 FER1L6-AS1Q8NA97 138 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ST20-AS1Q8NBB2 130 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 RTN4IP1Q8WWV3 396 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SPTSSAQ969W0 71 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM147Q9BVK8 224 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 WDR61Q9GZS3 305 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 BANF2Q9H503 90 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 FUT9Q9Y231 359 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF443Q9Y2A4 671 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF337Q9Y3M9 751 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 DNAJC15Q9Y5T4 150 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 IER3IP1Q9Y5U9 82 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PRRC2BQ5JSZ5 2229 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 AHCTF1Q8WYP5 2266 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 RIC1Q4ADV7 1423 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 MYO7AQ13402 2215 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CSPG4Q6UVK1 2322 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 MEIKINA0A087WXM9 373 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 LOC105371267A0A1B0GV96 52 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR2T8A6NH00 312 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM212A6NML5 194 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 K7ERS5 55 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 M0R3E3 92 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 PLA2G10O15496 165 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF737O75373 536 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 IL5P05113 134 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 SMIM17P0DL12 118 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF93P35789 620 aaPredicted RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms