RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 DENND4CQ5VZ89 1909 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 GNRH2O43555 120 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
PTCD3-201ENST00000254630 SCRT2Q9NQ03 307 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 IGLC7A0M8Q6 106 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 ADAMTSL5Q6ZMM2 481 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 Q6ZQT7 251 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 ZNF491Q8N8L2 437 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 RITA1Q96K30 269 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 IGKV2D-24A0A075B6R9 120 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 IGKV1OR2-108A0A075B7D4 117 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 SOCS3O14543 225 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 NXPH4O95158 308 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 NPYP01303 97 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 YLPM1P49750 1951 aaKnown RBP6.84□□□□□ -1.31
PTCD3-201ENST00000254630 F6UB75 175 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 EDA2RQ9HAV5 297 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 C9JQL5 133 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 CD5LO43866 347 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 ARHGEF17Q96PE2 2063 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-201ENST00000254630 TMEM131Q92545 1883 aa6.84□□□□□ -1.31
PTCD3-201ENST00000254630 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.32
PTCD3-201ENST00000254630 K7EQD1 137 aa6.84□□□□□ -1.32
PTCD3-201ENST00000254630 GP9P14770 177 aa6.84□□□□□ -1.32
PTCD3-201ENST00000254630 C10orf105Q8TEF2 133 aa6.84□□□□□ -1.32
PTCD3-201ENST00000254630 KLF5Q13887 457 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-201ENST00000254630 CEND1Q8N111 149 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 KIF26BQ2KJY2 2108 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 K7EN84 100 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 SMIM2Q9BVW6 85 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 RSPO3Q9BXY4 272 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-201ENST00000254630 DKK4Q9UBT3 224 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 ICOSQ9Y6W8 199 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 ADAMTS9Q9P2N4 1935 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
PTCD3-201ENST00000254630 LGALS9BQ3B8N2 356 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 LGALS9CQ6DKI2 356 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 ZNF664Q8N3J9 261 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-201ENST00000254630 IGKV2-29A2NJV5 120 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-201ENST00000254630 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 C5orf56Q8N8D9 126 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 FGF23Q9GZV9 251 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-201ENST00000254630 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 SPTBP11277 2137 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 CRLF1O75462 422 aa6.83□□□□□ -1.32
PTCD3-201ENST00000254630 ZNF106Q9H2Y7 1883 aaKnown RBP6.82□□□□□ -1.32
PTCD3-201ENST00000254630 XCL1P47992 114 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 A8MWP6 167 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 NRGNQ92686 78 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 A0A087WW49 117 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 IGHV7-81A0A0B4J1V7 117 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 INAFM2P0DMQ5 153 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 PYY3Q5JQD4 70 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 DSCR8Q96T75 97 aa6.82□□□□□ -1.32
PTCD3-201ENST00000254630 I3L2K1 104 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 PRR20EP86478 221 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 PRR20CP86479 221 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 PRR20DP86480 221 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 PRR20BP86481 221 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 PRR20AP86496 221 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 IGLV2-23P01705 113 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 TAL2Q16559 108 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 EGR2P11161 476 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-201ENST00000254630 UBE2V1Q13404 147 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 DAZAP2Q15038 168 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-201ENST00000254630 WIPF3A6NGB9 483 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 DLEU1O43261 78 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 C11orf52Q96A22 123 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 COX11Q9Y6N1 276 aa6.81□□□□□ -1.32
PTCD3-201ENST00000254630 F8W735 103 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-201ENST00000254630 UBE2BP63146 152 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 C10orf91Q5T1B1 145 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 C16orf54Q6UWD8 224 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 AJUBAQ96IF1 538 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 C9orf118A6NHY6 69 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 Q9HAA7 133 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 URB1O60287 2271 aaKnown RBP6.8□□□□□ -1.32
PTCD3-201ENST00000254630 Q6ZWC4 215 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 NDUFS6O75380 124 aaKnown RBP6.8□□□□□ -1.32
PTCD3-201ENST00000254630 COX8AP10176 69 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 RNF138Q8WVD3 245 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
PTCD3-201ENST00000254630 IGLV11-55A0A075B6I3 123 aa6.8□□□□□ -1.32
PTCD3-201ENST00000254630 ZNF493Q6ZR52 646 aa6.79□□□□□ -1.32
PTCD3-201ENST00000254630 FGF6P10767 208 aa6.79□□□□□ -1.32
PTCD3-201ENST00000254630 GYPEP15421 78 aa6.79□□□□□ -1.32
PTCD3-201ENST00000254630 FER1L5A0AVI2 2057 aa6.79□□□□□ -1.32
PTCD3-201ENST00000254630 TRBV20-1A0A075B6N2 111 aa6.79□□□□□ -1.32
PTCD3-201ENST00000254630 AGPAT4-IT1Q9H0P7 198 aa6.79□□□□□ -1.32
PTCD3-201ENST00000254630 IGHV3-30P01768 117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms