RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MFAP4P55083 255 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 DPF1Q92782 380 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 PRR25Q96S07 402 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 SPXQ9BT56 116 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 TTTY13Q9BZ97 58 aa8.22□□□□□ -1.09
CX3CL1-201ENST00000006053 GAS8-AS1O95177 125 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 EVI2AP22794 236 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 NBL1P41271 181 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 GAGE5Q13069 117 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 GAGE6Q13070 117 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 KLRD1Q13241 179 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 OR9G4Q8NGQ1 327 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 ARPC1AQ92747 370 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 FAM110AQ9BQ89 295 aa8.21□□□□□ -1.09
CX3CL1-201ENST00000006053 ASH1LQ9NR48 2969 aaKnown RBP8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 SCGB2A1O75556 95 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 LY6HO94772 140 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 ZNF418Q8TF45 676 aaPredicted RBP8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 RAB1BQ9H0U4 201 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 CENPEQ02224 2701 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 NCBP2LA6PVI3 153 aaKnown RBP8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 PRSS1P07477 247 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 GCSHP23434 173 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 PDE6HQ13956 83 aa8.21□□□□□ -1.1
CX3CL1-201ENST00000006053 LEPP41159 167 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 INSL3P51460 131 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 RPL32P62910 135 aaKnown RBP8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 OR4X2Q8NGF9 303 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 RNF5Q99942 180 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 FANCD2OSQ96PS1 177 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 DPM3Q9P2X0 92 aa8.2□□□□□ -1.1
CX3CL1-201ENST00000006053 LY6LH3BQJ8 138 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 CD3EP07766 207 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 GATA1P15976 413 aaPredicted RBP8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 RPL7P18124 248 aaKnown RBP8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 LINC01560Q8TB33 94 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 C20orf78Q9BR46 151 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 ERCC8Q13216 396 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 C8orf86Q6ZUL3 223 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 PAX8Q06710 450 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 YAE1D1Q9NRH1 226 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 ERG28Q9UKR5 140 aa8.19□□□□□ -1.1
CX3CL1-201ENST00000006053 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.19□□□□□ -1.13e-19■□□□□ 8.2
CX3CL1-201ENST00000006053 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 IGLV11-55A0A075B6I3 123 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 NDPQ00604 133 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 CYSLTR1Q9Y271 337 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 F8W735 103 aaPredicted RBP8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 K7EMI3 77 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 FXYD2P54710 66 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 GTSCR1Q86UQ5 136 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 RNF185Q96GF1 192 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 FOXC2Q99958 501 aa8.18□□□□□ -1.1
CX3CL1-201ENST00000006053 IGHV3-66A0A0C4DH42 116 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 IGLC6P0CF74 106 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 ZNF672Q499Z4 452 aaPredicted RBP8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 SYT8Q8NBV8 401 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 HIVEP3Q5T1R4 2406 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 IGHV3OR16-13A0A075B7E8 117 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 IGHV3-74A0A0B4J1X5 117 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 K7ERJ3 54 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 CFHR4Q92496 578 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 SMAD5-AS1Q9Y6J3 95 aa8.17□□□□□ -1.1
CX3CL1-201ENST00000006053 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 M0QXV9 152 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 LY6DQ14210 128 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 FOXI2Q6ZQN5 318 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 TMEM158Q8WZ71 300 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 C1QTNF4Q9BXJ3 329 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 FABP5P3A8MUU1 101 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 H3BMG7 143 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 DYNAPQ8N1N2 210 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 RNF182Q8N6D2 247 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 TMEM160Q9NX00 188 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 MYO18BQ8IUG5 2567 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 NDUFA3O95167 84 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 FCER1GP30273 86 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
CX3CL1-201ENST00000006053 FAM90A27PA6NNH2 459 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 IGKCP01834 107 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 IGHG4P01861 327 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 ZC2HC1BQ5TFG8 222 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 Q8NA96 180 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 NPBQ8NG41 125 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 CHAC1Q9BUX1 264 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 A0A1B0GWB2 263 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 CTSGP08311 255 aa8.15□□□□□ -1.1
CX3CL1-201ENST00000006053 ZNF562Q6V9R5 426 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms