RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ZNF256Q9Y2P7 627 aaPredicted RBP16.88■□□□□ 0.29
IRF3-228ENST00000601291 FBN1P35555 2871 aaKnown RBP16.87■□□□□ 0.29
IRF3-228ENST00000601291 MGST1P10620 155 aaKnown RBP16.87■□□□□ 0.29
IRF3-228ENST00000601291 HIST1H1AQ02539 215 aaPredicted RBP16.87■□□□□ 0.29
IRF3-228ENST00000601291 ERCC8Q13216 396 aa16.87■□□□□ 0.29
IRF3-228ENST00000601291 SAPCD1Q5SSQ6 148 aa16.87■□□□□ 0.29
IRF3-228ENST00000601291 TMEM183AQ8IXX5 376 aa16.87■□□□□ 0.29
IRF3-228ENST00000601291 WFDC9Q8NEX5 89 aa16.87■□□□□ 0.29
IRF3-228ENST00000601291 TENM1Q9UKZ4 2725 aa16.86■□□□□ 0.29
IRF3-228ENST00000601291 NPIPB6E9PJ23 425 aa16.86■□□□□ 0.29
IRF3-228ENST00000601291 IGLV2-8P01709 118 aa16.86■□□□□ 0.29
IRF3-228ENST00000601291 EBLN2Q6P2I7 272 aa16.86■□□□□ 0.29
IRF3-228ENST00000601291 AGPAT4-IT1Q9H0P7 198 aa16.86■□□□□ 0.29
IRF3-228ENST00000601291 WNK1Q9H4A3 2382 aa16.86■□□□□ 0.29
IRF3-228ENST00000601291 ZNF138P52744 262 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 Q8TAT8 98 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 ISOC2Q96AB3 205 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 LINC00477Q96M19 166 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 BIN3Q9NQY0 253 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 F6UB75 175 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 K7EN84 100 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 ZNF705DP0CH99 300 aaPredicted RBP16.85■□□□□ 0.29
IRF3-228ENST00000601291 ZNF705BP0CI00 300 aaPredicted RBP16.85■□□□□ 0.29
IRF3-228ENST00000601291 DEFB131AP59861 70 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 FOXI2Q6ZQN5 318 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 LURAP1LQ8IV03 231 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 SPATA3Q8NHX4 192 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 MLST8Q9BVC4 326 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 MAP6D1Q9H9H5 199 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 RPS10P5Q9NQ39 176 aa16.85■□□□□ 0.29
IRF3-228ENST00000601291 C7orf77A4D0Y5 90 aa16.84■□□□□ 0.29
IRF3-228ENST00000601291 GCGP01275 180 aa16.84■□□□□ 0.29
IRF3-228ENST00000601291 CMC4P56277 68 aaPredicted RBP16.84■□□□□ 0.29
IRF3-228ENST00000601291 DEFB1P60022 68 aa16.84■□□□□ 0.29
IRF3-228ENST00000601291 PRR25Q96S07 402 aa16.84■□□□□ 0.29
IRF3-228ENST00000601291 PPP1R14DQ9NXH3 145 aa16.84■□□□□ 0.29
IRF3-228ENST00000601291 ZNF492Q9P255 531 aa16.84■□□□□ 0.29
IRF3-228ENST00000601291 ATRAIDQ6UW56 229 aa16.83■□□□□ 0.28
IRF3-228ENST00000601291 SAV1Q9H4B6 383 aaPredicted RBP16.83■□□□□ 0.28
IRF3-228ENST00000601291 A0A0J9YX75 114 aa16.82■□□□□ 0.28
IRF3-228ENST00000601291 DUSP14O95147 198 aaKnown RBP16.82■□□□□ 0.28
IRF3-228ENST00000601291 MT-ND4LP03901 98 aa16.82■□□□□ 0.28
IRF3-228ENST00000601291 ASCL2Q99929 193 aa16.82■□□□□ 0.28
IRF3-228ENST00000601291 LENEPQ9Y5L5 61 aa16.82■□□□□ 0.28
IRF3-228ENST00000601291 CT45A10P0DMU9 189 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 OR5I1Q13606 314 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 PRR27Q6MZM9 219 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 SFRP2Q96HF1 295 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 GPR61Q9BZJ8 451 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 OR11H12B2RN74 326 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 ERVFC1-1P60608 527 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 ODF3L2Q3SX64 289 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 GDF5OSQ5U4N7 250 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 C8orf49Q96NF6 230 aa16.81■□□□□ 0.28
IRF3-228ENST00000601291 A0A087WWC5 75 aa16.8■□□□□ 0.28
IRF3-228ENST00000601291 BEAN1Q3B7T3 259 aa16.8■□□□□ 0.28
IRF3-228ENST00000601291 RNF212Q495C1 297 aa16.8■□□□□ 0.28
IRF3-228ENST00000601291 COX8CQ7Z4L0 72 aa16.8■□□□□ 0.28
IRF3-228ENST00000601291 C15orf54Q8N8G6 183 aa16.8■□□□□ 0.28
IRF3-228ENST00000601291 ANAPC16Q96DE5 110 aa16.8■□□□□ 0.28
IRF3-228ENST00000601291 TRBV7-9A0A0J9YWB2 115 aa16.79■□□□□ 0.28
IRF3-228ENST00000601291 PPP1R2P9O14990 202 aa16.79■□□□□ 0.28
IRF3-228ENST00000601291 IGLL1P15814 213 aa16.79■□□□□ 0.28
IRF3-228ENST00000601291 SMUG1Q53HV7 270 aa16.79■□□□□ 0.28
IRF3-228ENST00000601291 IBA57Q5T440 356 aaKnown RBP16.79■□□□□ 0.28
IRF3-228ENST00000601291 ZC2HC1AQ96GY0 325 aa16.79■□□□□ 0.28
IRF3-228ENST00000601291 FAM110AQ9BQ89 295 aa16.79■□□□□ 0.28
IRF3-228ENST00000601291 ACTL10Q5JWF8 245 aa16.78■□□□□ 0.28
IRF3-228ENST00000601291 CTDSP1Q9GZU7 261 aa16.78■□□□□ 0.28
IRF3-228ENST00000601291 HLA-DRB4P13762 266 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 FAM231DQ6ZW35 169 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 OR4B1Q8NGF8 309 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 OR10G8Q8NGN5 311 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 DAZAP1Q96EP5 407 aaKnown RBP16.77■□□□□ 0.28
IRF3-228ENST00000601291 ODF3Q96PU9 254 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 OSTCQ9NRP0 149 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 HLA-DRB4X5D2U9 266 aa16.77■□□□□ 0.28
IRF3-228ENST00000601291 KNCNA6PVL3 124 aa16.77■□□□□ 0.27
IRF3-228ENST00000601291 H7BYZ3 331 aa16.77■□□□□ 0.27
IRF3-228ENST00000601291 SCO1O75880 301 aa16.77■□□□□ 0.27
IRF3-228ENST00000601291 APRG1Q8IVJ8 170 aa16.77■□□□□ 0.27
IRF3-228ENST00000601291 MDFIQ99750 246 aa16.77■□□□□ 0.27
IRF3-228ENST00000601291 RNASE7Q9H1E1 156 aaKnown RBP16.77■□□□□ 0.27
IRF3-228ENST00000601291 WIPF1O43516 503 aa16.76■□□□□ 0.27
IRF3-228ENST00000601291 PRR31Q5SQ13 230 aa16.76■□□□□ 0.27
IRF3-228ENST00000601291 FAM19A4Q96LR4 140 aa16.76■□□□□ 0.27
IRF3-228ENST00000601291 TMEM242Q9NWH2 141 aa16.76■□□□□ 0.27
IRF3-228ENST00000601291 FAM162BQ5T6X4 162 aa16.75■□□□□ 0.27
IRF3-228ENST00000601291 GTSCR1Q86UQ5 136 aa16.75■□□□□ 0.27
IRF3-228ENST00000601291 H3BMM0 161 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 IGKV3-20P01619 116 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 P01737 135 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 CD7P09564 240 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 CRISP2P16562 243 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 LEPP41159 167 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 ZNF124Q15973 351 aa16.74■□□□□ 0.27
IRF3-228ENST00000601291 C19orf71A6NCJ1 209 aa16.73■□□□□ 0.27
IRF3-228ENST00000601291 RIPPLY3P57055 190 aa16.73■□□□□ 0.27
IRF3-228ENST00000601291 LINC00322Q6ZN03 302 aaPredicted RBP16.73■□□□□ 0.27
IRF3-228ENST00000601291 NUDT10Q8NFP7 164 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms