RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 AAMDCQ9H7C9 122 aa7□□□□□ -1.29
PTPN2-208ENST00000589216 PRELID1Q9Y255 219 aa7□□□□□ -1.29
PTPN2-208ENST00000589216 TRAV12-3A0A0B4J271 114 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 KLLNB2CW77 178 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 HTN3P15516 51 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 M6PRP20645 277 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 LEPP41159 167 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 TAS2R60P59551 318 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 RANP62826 216 aaKnown RBP6.99□□□□□ -1.29
PTPN2-208ENST00000589216 CD300CQ08708 224 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 ZNF266Q14584 549 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 RPL7L1Q6DKI1 246 aaKnown RBP6.99□□□□□ -1.29
PTPN2-208ENST00000589216 LGALS9CQ6DKI2 356 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 TMEM256Q8N2U0 113 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 OR2G3Q8NGZ4 309 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 ASB13Q8WXK3 278 aa6.99□□□□□ -1.29
PTPN2-208ENST00000589216 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 NACAE9PAV3 2078 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 TEX48A0A1B0GUV7 120 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 H7BYZ3 331 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 ARL14EPLP0DKL9 152 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 DAD1P61803 113 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 ACOT6Q3I5F7 207 aaPredicted RBP6.98□□□□□ -1.29
PTPN2-208ENST00000589216 C9orf47Q6ZRZ4 202 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 OR10G4Q8NGN3 311 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 OR10G9Q8NGN4 311 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 OR10G7Q8NGN6 311 aa6.98□□□□□ -1.29
PTPN2-208ENST00000589216 TMEM263Q8WUH6 116 aaKnown RBP6.98□□□□□ -1.29
PTPN2-208ENST00000589216 PSMG3Q9BT73 122 aaPredicted RBP6.98□□□□□ -1.29
PTPN2-208ENST00000589216 C7orf71A4D174 169 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 ARPC5O15511 151 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 CRISP2P16562 243 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 CDC34P49427 236 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-208ENST00000589216 TAS2R45P59539 299 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 GNG5P63218 68 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 C16orf74Q96GX8 76 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 C20orf144Q9BQM9 153 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
PTPN2-208ENST00000589216 RPH3ALQ9UNE2 315 aa6.97□□□□□ -1.29
PTPN2-208ENST00000589216 A0A1W2PPV4 95 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 SLC25A5P05141 298 aaKnown RBP6.96□□□□□ -1.3
PTPN2-208ENST00000589216 STAG3L2P0CL84 134 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 STAG3L3P0CL85 134 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 TCTAP57738 103 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 ZNF726P1Q15940 193 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 TMEM78Q5T7P6 136 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 PQLC2Q6ZP29 291 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 C11orf72Q8NBR9 251 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
PTPN2-208ENST00000589216 RAB24Q969Q5 203 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 HYLS1Q96M11 299 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 ZNF492Q9P255 531 aa6.96□□□□□ -1.3
PTPN2-208ENST00000589216 TRAV8-1A0A0A6YYK1 113 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 GGTLC3B5MD39 225 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 DIRC3C9JPN6 131 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 ZNF324O75467 553 aaPredicted RBP6.95□□□□□ -1.3
PTPN2-208ENST00000589216 GCHFRP30047 84 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 RNASE4P34096 147 aaKnown RBP6.95□□□□□ -1.3
PTPN2-208ENST00000589216 ZNF138P52744 262 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 LYPD1Q8N2G4 141 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 LINC00477Q96M19 166 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 OTORQ9NRC9 128 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 TP53TG3Q9ULZ0 132 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
PTPN2-208ENST00000589216 BIRC6Q9NR09 4857 aa6.94□□□□□ -1.3
PTPN2-208ENST00000589216 RBAKDNA6NC62 111 aa6.94□□□□□ -1.3
PTPN2-208ENST00000589216 GPX1P07203 203 aa6.94□□□□□ -1.3
PTPN2-208ENST00000589216 GOLT1AQ6ZVE7 132 aa6.94□□□□□ -1.3
PTPN2-208ENST00000589216 TVP23CQ96ET8 276 aa6.94□□□□□ -1.3
PTPN2-208ENST00000589216 PYGO2Q9BRQ0 406 aa6.94□□□□□ -1.3
PTPN2-208ENST00000589216 TIMM8BQ9Y5J9 83 aaPredicted RBP6.94□□□□□ -1.3
PTPN2-208ENST00000589216 MUC4Q99102 2169 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 BORCS7-ASMTA0A0B4J1R7 106 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 GAGE12BA1L429 117 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 PGPA6NDG6 321 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 F5H768 121 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 F6UZH7 168 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 GAGE7O76087 117 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 GAGE12FP0CL80 117 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 GAGE12GP0CL81 117 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 GAGE12IP0CL82 117 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 CSN1S1P47710 185 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
PTPN2-208ENST00000589216 SERF2P84101 59 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 Q6ZTI0 123 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 SUN5Q8TC36 379 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 SGK494Q96LW2 274 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 LINC00467Q9BRT7 94 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 TMPRSS5Q9H3S3 457 aa6.93□□□□□ -1.3
PTPN2-208ENST00000589216 GSN-AS1Q9NRJ2 163 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms