RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 ALKBH7Q9BT30 221 aaPredicted RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 FAM103A1Q9BTL3 118 aaKnown RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 NPCDR1Q9BY65 106 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 SLC25A39Q9BZJ4 359 aaPredicted RBP2.09□□□□□ -2.08
MCF2-208ENST00000519895 MFFQ9GZY8 342 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 FUT9Q9Y231 359 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
MCF2-208ENST00000519895 C9orf118A6NHY6 69 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 OR11H12B2RN74 326 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 C11orf94C9JXX5 98 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 H0YIZ8 118 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 K7EP13 123 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 ADAP1O75689 374 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 SPNP16150 400 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 M6PRP20645 277 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 H2BFSP57053 126 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 OR2B11Q5JQS5 317 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 LEMD1Q68G75 181 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 TCF24Q7RTU0 167 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 ZNF709Q8N972 641 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 LYPD6BQ8NI32 183 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 CASTOR1Q8WTX7 329 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 MAP6D1Q9H9H5 199 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 OTORQ9NRC9 128 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 RPRMQ9NS64 109 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 IGKV1OR2-108A0A075B7D4 117 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 OR2T8A6NH00 312 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 G3V3Q6 166 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 GOSR2O14653 212 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 SSNA1O43805 119 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 SSSCA1O60232 199 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 TRBV12-3P01733 135 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 STAG3L2P0CL84 134 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 SUMO2P61956 95 aaKnown RBP2.08□□□□□ -2.08
MCF2-208ENST00000519895 PSG3Q16557 428 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 IBA57Q5T440 356 aaKnown RBP2.08□□□□□ -2.08
MCF2-208ENST00000519895 C10orf113Q5VZT2 155 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 ZNF705AQ6ZN79 300 aaPredicted RBP2.08□□□□□ -2.08
MCF2-208ENST00000519895 C18orf65Q6ZTR6 163 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 OR10G4Q8NGN3 311 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 SCGB1C1Q8TD33 95 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 FAM167A-AS1Q96KT0 104 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 MS4A6AQ9H2W1 248 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 ZNF331Q9NQX6 463 aaPredicted RBP2.08□□□□□ -2.08
MCF2-208ENST00000519895 BIN3Q9NQY0 253 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 LY96Q9Y6Y9 160 aa2.08□□□□□ -2.08
MCF2-208ENST00000519895 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 A0A0J9YX75 114 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 CTXND1A0A1B0GTU2 59 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ZFP92A6NM28 416 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 LYRM9A8MSI8 78 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ZNF705FA8MVS1 300 aaPredicted RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 J3QRK9 145 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 BCL2L11O43521 198 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 HBE1P02100 147 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 OR10J4P0C629 311 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ZNF705DP0CH99 300 aaPredicted RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 ZNF705BP0CI00 300 aaPredicted RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 AKR1C1Q04828 323 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 USF2Q15853 346 aaPredicted RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 ODF3L2Q3SX64 289 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 TDRG1Q3Y452 100 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 SPANXN5Q5MJ07 72 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 FAM74A1Q5RGS3 127 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 Q6AWC8 147 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 UNQ9165/PRO28630Q6UXU0 137 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 PATE2Q6UY27 113 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 TMEM61Q8N0U2 210 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 INO80EQ8NBZ0 244 aaPredicted RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 CSNK1G2-AS1Q8NCQ2 148 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 OR11H7Q8NGC8 314 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 OR10J6PQ8NGY7 276 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 EDA2RQ9HAV5 297 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 DOK5Q9P104 306 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 DKK2Q9UBU2 259 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 KLF12Q9Y4X4 402 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 MPTX1A8MV57 137 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 PPP5D1E7EU14 171 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 H3BMM0 161 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 CXorf1O96002 111 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 IL4P05112 153 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ARL16Q0P5N6 197 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 DEFB121Q5J5C9 76 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 AMTNQ6UX39 209 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 SLC51BQ86UW2 128 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 TMEM75Q8N9X5 138 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ZNF680Q8NEM1 530 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 HIST1H2BAQ96A08 127 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 C11orf52Q96A22 123 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 IGF2BP2-AS1Q96M15 143 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 C17orf77Q96MU5 243 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 ACTR3CQ9C0K3 210 aaPredicted RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 CSTL1Q9H114 145 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 SH3BGRL3Q9H299 93 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 TMPRSS5Q9H3S3 457 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 TREM1Q9NP99 234 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 CYTL1Q9NRR1 136 aa2.07□□□□□ -2.08
MCF2-208ENST00000519895 MRPL36Q9P0J6 103 aaKnown RBP2.07□□□□□ -2.08
MCF2-208ENST00000519895 MDFICQ9P1T7 246 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms