RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 METTL27Q8N6F8 245 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 C7orf33Q8WU49 177 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 LINC00526Q96FQ7 95 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 C2orf50Q96LR7 162 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 C8orf49Q96NF6 230 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 IGHV3-74A0A0B4J1X5 117 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 ETV6P41212 452 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 UBE2BP63146 152 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 C2orf83Q53S99 150 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 MIC13Q5XKP0 118 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 MORN3Q6PF18 240 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 C20orf203Q8NBC4 194 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 BPIFB6Q8NFQ5 453 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 TXNL4BQ9NX01 149 aaKnown RBP4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 HHLA3Q9XRX5 114 aa4.45□□□□□ -1.7
TRAPPC11-209ENST00000512476 A0A0D9SG52 128 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 MDFIC2A0A1B0GVS7 189 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 LEPROTO15243 131 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 FABP4P15090 132 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 HERVK_113P61574 105 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 OR10AC1Q8NH08 325 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 HYLS1Q96M11 299 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 PRELID3AQ96N28 172 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 BCL2L10Q9HD36 194 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 RAI1Q7Z5J4 1906 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 CEP192Q8TEP8 1941 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 TRAV12-2A0A075B6T6 113 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 IGHV3OR16-10A0A075B7F0 116 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 STATHP02808 62 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 TPT1P13693 172 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 NANOS2P60321 138 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 CLECL1Q8IZS7 167 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 Q8N2B8 174 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 OR5AK2Q8NH90 309 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 MRPS24Q96EL2 167 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 NPCDR1Q9BY65 106 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
TRAPPC11-209ENST00000512476 TCRBV3S1A0A5B6 114 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 SSR2P43308 183 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 DEFB133Q30KQ1 61 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 FP248Q71RG6 208 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 OR10P1Q8NGE3 313 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 C7orf66A4D0T2 115 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 H3BT86 120 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 UQCRQO14949 82 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 CPSF4O95639 269 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 CD3DP04234 171 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 PLA2G2AP14555 144 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 EIF5AP63241 154 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 IQCJQ1A5X6 159 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 CASC10Q5T4H9 136 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 GUSBP11Q6P575 273 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 MORN4Q8NDC4 146 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 TSLPQ969D9 159 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 B9D2Q9BPU9 175 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 TNRC6BQ9UPQ9 1833 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 CCDC88CQ9P219 2028 aa4.43□□□□□ -1.7
TRAPPC11-209ENST00000512476 C10orf111Q8N326 155 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 TMEM105Q8N8V8 129 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 NPBQ8NG41 125 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 CHCHD5Q9BSY4 110 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 HEATR5BQ9P2D3 2071 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 ABCA7Q8IZY2 2146 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 H0YGG7 62 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 OR5AC1P0C628 307 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 Q56UQ5 140 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 AMTNQ6UX39 209 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 FAM60AQ9NP50 221 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 TMEM106BQ9NUM4 274 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 THADAQ6YHU6 1953 aa4.42□□□□□ -1.7
TRAPPC11-209ENST00000512476 RBAKDNA6NC62 111 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 SLC25A6P12236 298 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 TAS2R45P59539 299 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 GNB1P62873 340 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 CCL20P78556 96 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 KLF9Q13886 244 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 C19orf48Q6RUI8 117 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 C15orf40Q8WUR7 153 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 PSMF1Q92530 271 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 AP4S1Q9Y587 144 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 LOC107986453A0A1B0GWG9 222 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 NDUFB3O43676 98 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 S100A4P26447 101 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 CXCL5P42830 114 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 DEFB110Q30KQ9 67 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 HIST1H2BLQ99880 126 aa4.41□□□□□ -1.7
TRAPPC11-209ENST00000512476 TECTAO75443 2155 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 UBL3O95164 117 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 CD7P09564 240 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 CRYGAP11844 174 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 EBI3Q14213 229 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 DEFB134Q4QY38 66 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 SLC48A1Q6P1K1 146 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 Q6ZS92 163 aa4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC11-209ENST00000512476 NAA60Q9H7X0 242 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms