RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 BSXQ3C1V8 233 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 FAM106AQ4KMX7 169 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 ZNF585BQ52M93 769 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 UNQ9165/PRO28630Q6UXU0 137 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 GPHB5Q86YW7 130 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 SELENOHQ8IZQ5 122 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 TTC9CQ8N5M4 171 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 TEX45Q8NA69 505 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 GRAMD2BQ96HH9 432 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 CIB3Q96Q77 187 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 ZNF430Q9H8G1 570 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 KCNIP2Q9NS61 270 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 FAT2Q9NYQ8 4349 aa4.73□□□□□ -1.65
TMEM39A-209ENST00000486235 MUC4Q99102 2169 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 IGHV3-35A0A0C4DH35 117 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 CTXND1A0A1B0GTU2 59 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 MAP1LC3B2A6NCE7 125 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 FAM24AA6NFZ4 105 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 ZNF727A8MUV8 499 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 C17orf112F2Z3M2 114 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 F6UZH7 168 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 TCAPO15273 167 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 MPDU1O75352 247 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 S1PR2O95136 353 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 PFN1P07737 140 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 LINC00614P0C842 121 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 GZMBP10144 247 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 F2RP25116 425 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 OR10J1P30954 320 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 GNRHRP30968 328 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 FHITP49789 147 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 CNN1P51911 297 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 FXYD4P59646 89 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 ERVFC1-1P60608 527 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 PHLDA2Q53GA4 152 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 OR4A47Q6IF82 309 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 OR5B3Q8NH48 314 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 C11orf45Q8TAV5 145 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 FRZBQ92765 325 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 TP53RKQ96S44 253 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 SPAG8Q99932 426 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 RARRES2Q99969 163 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 SMIM7Q9BQ49 75 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 MAP1LC3BQ9GZQ8 125 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 DNAJC4Q9NNZ3 241 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 GNG13Q9P2W3 67 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 ZNF257Q9Y2Q1 563 aa4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 RBM7Q9Y580 266 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-209ENST00000486235 DNAH17Q9UFH2 4485 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 IGKV1D-8A0A087WSZ0 117 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 TGIF2-C20orf24A0A0A6YYL0 155 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 TRAV25A0A0B4J276 109 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 KIR2DL5BA0A0G2JN68 375 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 KIR2DL5BA0A0G2JPC4 375 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 A0A1B0GVY2 172 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 XKRY2A2RUG3 117 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 IGLL5B9A064 214 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 DEFB4AO15263 64 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 SYNGR2O43760 224 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 AMBPP02760 352 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 GPR183P32249 361 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 DUTP33316 252 aaKnown RBP4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 USF2Q15853 346 aaPredicted RBP4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 ODF3L2Q3SX64 289 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 SP6Q3SY56 376 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 ACTL10Q5JWF8 245 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 C1orf194Q5T5A4 169 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 TOMM20LQ6UXN7 152 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 MMD2Q8IY49 270 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 VKORC1L1Q8N0U8 176 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 KIR2DL5AQ8N109 375 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 OR51G1Q8NGK1 321 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 OR4X1Q8NH49 305 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 KIR2DL5BQ8NHK3 375 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 OSR1Q8TAX0 266 aaPredicted RBP4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 EEF1AKMT3Q96AZ1 226 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 MAP6D1Q9H9H5 199 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 SLC39A9Q9NUM3 307 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 OR2W1Q9Y3N9 320 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 LY96Q9Y6Y9 160 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 ARL2-SNX15V9GYD0 113 aa4.71□□□□□ -1.66
TMEM39A-209ENST00000486235 CEBPZOSA8MTT3 80 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 E7EUB6 86 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 PGLYRP1O75594 196 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 MT-ND6P03923 174 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 REG1AP05451 166 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 C8orf88P0DMB2 117 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 ESDP10768 282 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 MYOD1P15172 320 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 RPL27AP46776 148 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 GALR1P47211 349 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 CCL20P78556 96 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 TMEM183BQ1AE95 376 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 C10orf25Q5T742 122 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 APRG1Q8IVJ8 170 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 ZNF709Q8N972 641 aa4.7□□□□□ -1.66
TMEM39A-209ENST00000486235 OR10J5Q8NHC4 309 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms