RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 SUPT4H1P63272 117 aaKnown RBP3.91□□□□□ -1.78
HDAC3-206ENST00000471968 MAJINQ3KP22 176 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 IDNKQ5T6J7 187 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 MZT2AQ6P582 158 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 TMEM91Q6ZNR0 172 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 STPG4Q8N801 248 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 TMEM75Q8N9X5 138 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 OR8A1Q8NGG7 326 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 OR4D10Q8NGI6 311 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 UBE2WQ96B02 151 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 MIXL1Q9H2W2 232 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 PLEKHA2Q9HB19 425 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 BIN3Q9NQY0 253 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 CCL28Q9NRJ3 127 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 TXNL4BQ9NX01 149 aaKnown RBP3.91□□□□□ -1.78
HDAC3-206ENST00000471968 FKBP11Q9NYL4 201 aa3.91□□□□□ -1.78
HDAC3-206ENST00000471968 TRAV12-3A0A0B4J271 114 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 SMLR1H3BR10 107 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 WRBO00258 174 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 MPC2O95563 127 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 KRASP01116 189 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 RD3LP0DJH9 198 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 SULT1A3P0DMM9 295 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 SULT1A4P0DMN0 295 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 S100GP29377 79 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 G6PCP35575 357 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 SNCAP37840 140 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 OR10A3P58181 314 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 VWC2Q2TAL6 325 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 LGALSLQ3ZCW2 172 aaPredicted RBP3.9□□□□□ -1.79
HDAC3-206ENST00000471968 CDNFQ49AH0 187 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 PLAC9Q5JTB6 97 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 CNIH2Q6PI25 160 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 OR8I2Q8N0Y5 310 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 OR51H1Q8NH63 302 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 SLC25A38Q96DW6 304 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 S100A16Q96FQ6 103 aaKnown RBP3.9□□□□□ -1.79
HDAC3-206ENST00000471968 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 TCEAL7Q9BRU2 100 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 COMMD9Q9P000 198 aa3.9□□□□□ -1.79
HDAC3-206ENST00000471968 IGLV7-46A0A075B6I9 117 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 TRAV18A0A075B6X5 111 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 TRAV8-2A0A0B4J237 113 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 CORTO00230 105 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 TMEM127O75204 238 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 TOMM40O96008 361 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 HLA-DQA1P01909 254 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 NMBP08949 121 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 DTYMKP23919 212 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 RND2P52198 227 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 TCL1AP56279 114 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 HERV-K104P61576 105 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 QRFPP83859 136 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 CATR1Q13166 79 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 C1orf194Q5T5A4 169 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 FAM89BQ8N5H3 189 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 ASB13Q8WXK3 278 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 SEC22CQ9BRL7 303 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 RSG1Q9BU20 258 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 PDCD10Q9BUL8 212 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 KLK12Q9UKR0 248 aa3.89□□□□□ -1.79
HDAC3-206ENST00000471968 A0A0A6YYH2 397 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 IGKV2-24A0A0C4DH68 120 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 A6NJ64 397 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 S100A9P06702 114 aaKnown RBP3.88□□□□□ -1.79
HDAC3-206ENST00000471968 FABP1P07148 127 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 PFN1P07737 140 aaKnown RBP3.88□□□□□ -1.79
HDAC3-206ENST00000471968 PSG1P11464 419 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 RPL35P42766 123 aaKnown RBP3.88□□□□□ -1.79
HDAC3-206ENST00000471968 AKR1D1P51857 326 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 IL18Q14116 193 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 OPCMLQ14982 345 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 UBE2NLQ5JXB2 153 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 UQCC3Q6UW78 93 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 Q6ZQT7 251 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 TMEM17Q86X19 198 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 STX12Q86Y82 276 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 SAMD12Q8N8I0 201 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 SLC24A4Q8NFF2 622 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 OR11H4Q8NGC9 324 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 NUDCD2Q8WVJ2 157 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 SECTM1Q8WVN6 248 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 GFI1Q99684 422 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 C1orf43Q9BWL3 253 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 COMMD3Q9UBI1 195 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
HDAC3-206ENST00000471968 TRAV6A0A075B6T7 132 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 HMSDA8MTL9 139 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 LINC00587B1AMM8 73 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 TEX46H3BTG2 121 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 L7N2F9 121 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 CFDP00746 253 aaPredicted RBP3.87□□□□□ -1.79
HDAC3-206ENST00000471968 GIPP09681 153 aaPredicted RBP3.87□□□□□ -1.79
HDAC3-206ENST00000471968 CT45A10P0DMU9 189 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 RNASE2P10153 161 aaKnown RBP3.87□□□□□ -1.79
HDAC3-206ENST00000471968 S100PP25815 95 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 BTCP35070 178 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 HRH1P35367 487 aa3.87□□□□□ -1.79
HDAC3-206ENST00000471968 RPL13AP40429 203 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms