RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 DHRS3O75911 302 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 CYB5AP00167 134 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 MAS1P04201 325 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 ANP32AP39687 249 aaKnown RBP1.87□□□□□ -2.11
VPS13A-210ENST00000471439 IFFO1Q0D2I5 559 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 ATP6V1FQ16864 119 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 KLK9Q2XQG4 91 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 FER1L6-AS1Q8NA97 138 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 C1orf64Q8NEQ6 169 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 OR10K1Q8NGX5 313 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 BLNKQ8WV28 456 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 RNF133Q8WVZ7 376 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 MAGOHBQ96A72 148 aaKnown RBP1.87□□□□□ -2.11
VPS13A-210ENST00000471439 TESCQ96BS2 214 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 DERL3Q96Q80 235 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 SEC22CQ9BRL7 303 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 TPT1P8Q9HAU6 139 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 KLK9Q9UKQ9 250 aa1.87□□□□□ -2.11
VPS13A-210ENST00000471439 CHTOPQ9Y3Y2 248 aaKnown RBP1.87□□□□□ -2.11
VPS13A-210ENST00000471439 TRAV8-1A0A0A6YYK1 113 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 A8MWL6 223 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 H3BQF6 201 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 NDUFS5O43920 106 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 HBZP02008 142 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 SEC11BP0C7V7 166 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 STAG3L2P0CL84 134 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 S100A3P33764 101 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 RPS11P62280 158 aaKnown RBP eCLIP1.86□□□□□ -2.11
VPS13A-210ENST00000471439 PSG9Q00887 426 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 ST3GAL4Q11206 333 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 DHRS2Q13268 280 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 PMVKQ15126 192 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 SPA17Q15506 151 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 IDO2Q6ZQW0 420 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 DHFR2Q86XF0 187 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 TMEM75Q8N9X5 138 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 OR6K6Q8NGW6 343 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 OR4K13Q8NH42 304 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 VSTM2AQ8TAG5 236 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 TWIST2Q8WVJ9 160 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 FXYD5Q96DB9 178 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 CENPNQ96H22 339 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-210ENST00000471439 DNAJC30Q96LL9 226 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 OR2S2Q9NQN1 319 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 TMEM216Q9P0N5 145 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 ORC6Q9Y5N6 252 aa1.86□□□□□ -2.11
VPS13A-210ENST00000471439 TRAV8-7A0A075B6U6 113 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 IGKV1OR2-108A0A075B7D4 117 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 FAM240AA0A1B0GVK7 77 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 LOC107986453A0A1B0GWG9 222 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 E7EUB6 86 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 HTN1P15515 57 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 HIST1H1BP16401 226 aaKnown RBP1.85□□□□□ -2.11
VPS13A-210ENST00000471439 HIST1H1CP16403 213 aaKnown RBP1.85□□□□□ -2.11
VPS13A-210ENST00000471439 FXYD6P3P58550 94 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 CDK6Q00534 326 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 ZNF846Q147U1 533 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 TAL2Q16559 108 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 SLC35F6Q8N357 371 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 DIRC1Q969H9 104 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 YIPF6Q96EC8 236 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 GPX7Q96SL4 187 aaPredicted RBP1.85□□□□□ -2.11
VPS13A-210ENST00000471439 MAP1LC3CQ9BXW4 147 aa1.85□□□□□ -2.11
VPS13A-210ENST00000471439 IGHV3-21A0A0B4J1V1 117 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 TMEM30CPA0ZSE6 113 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 RFXANKO14593 260 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 CRXO43186 299 aaPredicted RBP1.84□□□□□ -2.11
VPS13A-210ENST00000471439 DCTN3O75935 186 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 DHFRP00374 187 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 HRASP01112 189 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 KRASP01116 189 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 RLN2P04090 185 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 IGLV7-43P04211 117 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 CTSGP08311 255 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 OR5AC1P0C628 307 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 DEFA4P12838 97 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 SRIP30626 198 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 KCNJ3P48549 501 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 RPL19P84098 196 aaKnown RBP1.84□□□□□ -2.11
VPS13A-210ENST00000471439 EMX2Q04743 252 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 CDNFQ49AH0 187 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 FAM104BQ5XKR9 115 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 ADM2Q7Z4H4 148 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 ZNF680Q8NEM1 530 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 TMEM167AQ8TBQ9 72 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 BORCS8Q96FH0 119 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 ABHD14BQ96IU4 210 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 ERMAPQ96PL5 475 aaPredicted RBP1.84□□□□□ -2.11
VPS13A-210ENST00000471439 FLVCR2Q9UPI3 526 aa1.84□□□□□ -2.11
VPS13A-210ENST00000471439 A6NN06 94 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 PFN1P07737 140 aaKnown RBP1.83□□□□□ -2.12
VPS13A-210ENST00000471439 OR5AL1P0C617 328 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 HLA-GP17693 338 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 HTR2CP28335 458 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 CRYBA4P53673 196 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 B2MP61769 119 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 SNRPD3P62318 126 aaKnown RBP1.83□□□□□ -2.12
VPS13A-210ENST00000471439 RSU1Q15404 277 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 MAPRE2Q15555 327 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms