RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TOMM20LQ6UXN7 152 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 SIGLEC15Q6ZMC9 328 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 TMEM91Q6ZNR0 172 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 STHQ8IWL8 128 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 FAM223AQ8IWN6 122 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 KCNRGQ8N5I3 272 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 Q8N814 137 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 OR2T12Q8NG77 320 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 SLC25A46Q96AG3 418 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 OR10C1Q96KK4 312 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 GINS3Q9BRX5 216 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 UPK3BQ9BT76 320 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 TM2D1Q9BX74 207 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 NMNAT2Q9BZQ4 307 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 MRPL16Q9NX20 251 aaKnown RBP3.2□□□□□ -1.9
SDCBP-205ENST00000447267 BET1LQ9NYM9 111 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 THYN1Q9P016 225 aa3.2□□□□□ -1.9
SDCBP-205ENST00000447267 IGHV3OR16-12A0A075B7B8 117 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 A0A087WX48 190 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 TRAV3A0A0B4J244 114 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 A0A1B0GTI1 187 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 IFITM5A6NNB3 132 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 KNCNA6PVL3 124 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF705FA8MVS1 300 aaPredicted RBP3.19□□□□□ -1.9
SDCBP-205ENST00000447267 PRR32B1ATL7 298 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 NME4O00746 187 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 SOX14O95416 240 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 CYB5AP00167 134 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 IFNA1P01562 189 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 TTRP02766 147 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF705DP0CH99 300 aaPredicted RBP3.19□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF705BP0CI00 300 aaPredicted RBP3.19□□□□□ -1.9
SDCBP-205ENST00000447267 DHRS2Q13268 280 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 PSG5Q15238 335 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 KCNIP4Q6PIL6 250 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 TEX43Q6ZNM6 134 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF833PQ6ZTB9 187 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 Q6ZVH6 145 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 OR10V1Q8NGI7 309 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 OR1B1Q8NGR6 318 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 OR6K6Q8NGW6 343 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 OCC1Q8TAD7 63 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 RAB40CQ96S21 281 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 CTDSP1Q9GZU7 261 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 TAF9BQ9HBM6 251 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 AMBNQ9NP70 447 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 TXNL4BQ9NX01 149 aaKnown RBP3.19□□□□□ -1.9
SDCBP-205ENST00000447267 PSORS1C1Q9UIG5 152 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 TRAPPC2LQ9UL33 140 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 LAMTOR2Q9Y2Q5 125 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 MRPS16Q9Y3D3 137 aaKnown RBP3.19□□□□□ -1.9
SDCBP-205ENST00000447267 ETV7Q9Y603 341 aa3.19□□□□□ -1.9
SDCBP-205ENST00000447267 IGHV3OR16-8A0A075B7F1 116 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 TRBV4-1A0A0J9YWV2 114 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 A0A0U1RRA0 63 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 BBIP1A8MTZ0 92 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 SNRPGP15A8MWD9 76 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 H0YJW9 148 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 GABRPO00591 440 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 DEGS1O15121 323 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF207O43670 478 aaKnown RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 OR2J3O76001 311 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 TRGC2P03986 189 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 HIST1H1EP10412 219 aaKnown RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 PMCHP20382 165 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 SNCAP37840 140 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 CNN1P51911 297 aaKnown RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 FUT6P51993 359 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 RPL8P62917 257 aaKnown RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 SELENOWP63302 87 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 HSD52Q0P140 79 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 OR2F1Q13607 317 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF345Q14585 488 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 SSX1Q16384 188 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 C15orf32Q32M92 178 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 AADACL3Q5VUY0 350 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 C19orf35Q6ZS72 473 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 GTF2H5Q6ZYL4 71 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 FA2HQ7L5A8 372 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 NEGR1Q7Z3B1 354 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 TRPT1Q86TN4 253 aaKnown RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 FAM219AQ8IW50 185 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 OR10G4Q8NGN3 311 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 OR10G9Q8NGN4 311 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 LGALS14Q8TCE9 139 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 BTF3L4Q96K17 158 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 NDFIP1Q9BT67 221 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 DERL1Q9BUN8 251 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 VAMP8Q9BV40 100 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF471Q9BX82 626 aaPredicted RBP3.18□□□□□ -1.9
SDCBP-205ENST00000447267 GABARAPL1Q9H0R8 117 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 ATG5Q9H1Y0 275 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 TAS2R8Q9NYW2 309 aa3.18□□□□□ -1.9
SDCBP-205ENST00000447267 ZNF581Q9P0T4 197 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms