RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PATE2Q6UY27 113 aa10.74□□□□□ -0.69
SNCA-205ENST00000394991 MARVELD1Q9BSK0 173 aa10.74□□□□□ -0.69
SNCA-205ENST00000394991 C11orf1Q9H5F2 150 aa10.74□□□□□ -0.69
SNCA-205ENST00000394991 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
SNCA-205ENST00000394991 SSNA1O43805 119 aa10.73□□□□□ -0.69
SNCA-205ENST00000394991 LRRC37A5PQ49AS3 106 aa10.73□□□□□ -0.69
SNCA-205ENST00000394991 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
SNCA-205ENST00000394991 TMEM252Q8N6L7 170 aa10.73□□□□□ -0.69
SNCA-205ENST00000394991 ARL6Q9H0F7 186 aa10.73□□□□□ -0.69
SNCA-205ENST00000394991 LYRM2Q9NU23 88 aaPredicted RBP10.73□□□□□ -0.69
SNCA-205ENST00000394991 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 IGSF23A1L1A6 192 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 SLC17A3O00476 420 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 AGPAT2O15120 278 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 CXCL2P19875 107 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 SULT1A1P50225 295 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 LCN15Q6UWW0 184 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 ZNF546Q86UE3 836 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 STX12Q86Y82 276 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 C11orf72Q8NBR9 251 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 GSN-AS1Q9NRJ2 163 aa10.72□□□□□ -0.69
SNCA-205ENST00000394991 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 TRGV2A0A075B6R0 118 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 CT45A10P0DMU9 189 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 MGST2Q99735 147 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 NMES1Q9C002 83 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 UQCC1Q9NVA1 299 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 ICOSQ9Y6W8 199 aa10.71□□□□□ -0.69
SNCA-205ENST00000394991 H3BTX0 84 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 S100A11P31949 105 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 CAMLGP49069 296 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 HBG1P69891 147 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 HBG2P69892 147 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 CYCSP99999 105 aaKnown RBP10.7□□□□□ -0.7
SNCA-205ENST00000394991 BAXQ07812 192 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 RAB31Q13636 194 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 S100A7AQ86SG5 101 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 PYGO2Q9BRQ0 406 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 FUT9Q9Y231 359 aa10.7□□□□□ -0.7
SNCA-205ENST00000394991 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 UBE2L5PA0A1B0GUS4 154 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 PAX4O43316 350 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 COX7A2P2O60397 106 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 ZNF324O75467 553 aaPredicted RBP10.69□□□□□ -0.7
SNCA-205ENST00000394991 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 WDR83OSQ9Y284 106 aa10.69□□□□□ -0.7
SNCA-205ENST00000394991 E5RGE8 158 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 NPIPB6E9PJ23 425 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 LEPP41159 167 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 H2BFSP57053 126 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 NHLH2Q02577 135 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 ATP6V1FQ16864 119 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 PXDC1Q5TGL8 231 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 MORN5Q5VZ52 161 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 MIC13Q5XKP0 118 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 Q6ZRG5 221 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 LINC00305Q7Z4B0 112 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 SLC25A31Q9H0C2 315 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 KLF12Q9Y4X4 402 aa10.68□□□□□ -0.7
SNCA-205ENST00000394991 H0YIZ8 118 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 FGF7P21781 194 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 VWC2Q2TAL6 325 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 WFDC10BQ8IUB3 73 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 ZNF680Q8NEM1 530 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 PPP1R1CQ8WVI7 109 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
SNCA-205ENST00000394991 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
SNCA-205ENST00000394991 SPINK4O60575 86 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 OR5C1Q8NGR4 320 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 TMEM37Q8WXS4 190 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 SAT2Q96F10 170 aaPredicted RBP10.66□□□□□ -0.7
SNCA-205ENST00000394991 ST6GAL2Q96JF0 529 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 ALG5Q9Y673 324 aa10.66□□□□□ -0.7
SNCA-205ENST00000394991 TRAV9-2A0A087WT02 112 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 IGLV5-52A0A0A0MRZ9 124 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 C7orf71A4D174 169 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 H3BQ15 152 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 PTTG1O95997 202 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 CRYBA4P53673 196 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 TCL1AP56279 114 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 HMCN2Q8NDA2 5059 aa10.65□□□□□ -0.7
SNCA-205ENST00000394991 LRP1Q07954 4544 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms