RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NDUFB4O95168 129 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 INSP01308 110 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 PYYP10082 97 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 TCTAP57738 103 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 RRN3P1Q2M238 152 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 SLC25A2Q9BXI2 301 aa13.2□□□□□ -0.3
SHKBP1-202ENST00000593764 ZNF705GA8MUZ8 300 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-202ENST00000593764 FAM222AQ5U5X8 452 aa13.19□□□□□ -0.3
SHKBP1-202ENST00000593764 WFDC1Q9HC57 220 aa13.19□□□□□ -0.3
SHKBP1-202ENST00000593764 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
SHKBP1-202ENST00000593764 DEFB131BA0A096LNP1 70 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 CDKN1BP46527 198 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 FCN2Q15485 313 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 SMIM3Q9BZL3 60 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 KCNIP2Q9NS61 270 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 PPP1R14DQ9NXH3 145 aa13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-202ENST00000593764 DNAH6Q9C0G6 4158 aa13.17□□□□□ -0.3
SHKBP1-202ENST00000593764 M0R3E3 92 aa13.17□□□□□ -0.3
SHKBP1-202ENST00000593764 AZU1P20160 251 aa13.17□□□□□ -0.3
SHKBP1-202ENST00000593764 PDE6HQ13956 83 aa13.17□□□□□ -0.3
SHKBP1-202ENST00000593764 MRPL53Q96EL3 112 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-202ENST00000593764 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-202ENST00000593764 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 BLNKQ8WV28 456 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 NIPSNAP3BQ9BS92 247 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 MED28Q9H204 178 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 FUT9Q9Y231 359 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 EPPK1P58107 5090 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-202ENST00000593764 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 NPIPB6E9PJ23 425 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 IFNA5P01569 189 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 TSPOP30536 169 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 LINC01587Q99440 93 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 MRPL32Q9BYC8 188 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 OR51M1Q9H341 326 aa13.15□□□□□ -0.3
SHKBP1-202ENST00000593764 NBEAP1P0C6P0 100 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 OXA1LQ15070 435 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 Q5BKY6 102 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 FFAR4Q5NUL3 377 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 FXYD5Q96DB9 178 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 ZNF503Q96F45 646 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 PRELID1Q9Y255 219 aa13.14□□□□□ -0.31
SHKBP1-202ENST00000593764 TAS2R60P59551 318 aa13.13□□□□□ -0.31
SHKBP1-202ENST00000593764 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
SHKBP1-202ENST00000593764 RNF141Q8WVD5 230 aa13.13□□□□□ -0.31
SHKBP1-202ENST00000593764 ODF3Q96PU9 254 aa13.13□□□□□ -0.31
SHKBP1-202ENST00000593764 PAXXQ9BUH6 204 aa13.13□□□□□ -0.31
SHKBP1-202ENST00000593764 OR10J4P0C629 311 aa13.12□□□□□ -0.31
SHKBP1-202ENST00000593764 ERCC8Q13216 396 aa13.12□□□□□ -0.31
SHKBP1-202ENST00000593764 ICAM4Q14773 271 aa13.12□□□□□ -0.31
SHKBP1-202ENST00000593764 C20orf144Q9BQM9 153 aa13.12□□□□□ -0.31
SHKBP1-202ENST00000593764 FRAS1Q86XX4 4008 aa13.11□□□□□ -0.31
SHKBP1-202ENST00000593764 HTN1P15515 57 aa13.11□□□□□ -0.31
SHKBP1-202ENST00000593764 AGPAT4-IT1Q9H0P7 198 aa13.11□□□□□ -0.31
SHKBP1-202ENST00000593764 LYRM9A8MSI8 78 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 H7BYZ3 331 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 GIPP09681 153 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 DAD1P61803 113 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 PHYHIPLQ96FC7 376 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 AQP10Q96PS8 301 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 AAMDCQ9H7C9 122 aa13.1□□□□□ -0.31
SHKBP1-202ENST00000593764 J3KRW8 73 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 OR7C2O60412 319 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 LEPP41159 167 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 C9orf47Q6ZRZ4 202 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 RNASE8Q8TDE3 154 aaKnown RBP13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 NDUFAF3Q9BU61 184 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 DNAH10Q8IVF4 4471 aa13.09□□□□□ -0.31
SHKBP1-202ENST00000593764 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 TRAV12-3A0A0B4J271 114 aa13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 M6PRP20645 277 aa13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 RGS21Q2M5E4 152 aa13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 ASB13Q8WXK3 278 aa13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 VGLL1Q99990 258 aa13.08□□□□□ -0.32
SHKBP1-202ENST00000593764 KLLNB2CW77 178 aa13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 HTN3P15516 51 aa13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 RANP62826 216 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
SHKBP1-202ENST00000593764 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms