RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RGS21Q2M5E4 152 aa9.43□□□□□ -0.9
PRKDC-206ENST00000536429 BLNKQ8WV28 456 aa9.43□□□□□ -0.9
PRKDC-206ENST00000536429 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
PRKDC-206ENST00000536429 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
PRKDC-206ENST00000536429 ZNF705GA8MUZ8 300 aaPredicted RBP9.42□□□□□ -0.9
PRKDC-206ENST00000536429 INSP01308 110 aa9.42□□□□□ -0.9
PRKDC-206ENST00000536429 HIST1H1EP10412 219 aaKnown RBP9.42□□□□□ -0.9
PRKDC-206ENST00000536429 GUK1Q16774 197 aa9.42□□□□□ -0.9
PRKDC-206ENST00000536429 FFAR4Q5NUL3 377 aa9.42□□□□□ -0.9
PRKDC-206ENST00000536429 EXOC3-AS1Q8N2X6 119 aa9.42□□□□□ -0.9
PRKDC-206ENST00000536429 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
PRKDC-206ENST00000536429 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 SMIM9A6NGZ8 99 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 ZNF253O75346 499 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 IFNA5P01569 189 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 HBE1P02100 147 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 AMBPP02760 352 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 GIPP09681 153 aaPredicted RBP9.41□□□□□ -0.9
PRKDC-206ENST00000536429 OR10J4P0C629 311 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
PRKDC-206ENST00000536429 SCGB1C1Q8TD33 95 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 TMEM208Q9BTX3 173 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 FUT9Q9Y231 359 aa9.41□□□□□ -0.9
PRKDC-206ENST00000536429 LY6G6CO95867 125 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 AZU1P20160 251 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 ERCC8Q13216 396 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 C2CD4CQ8TF44 421 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 PHYHIPLQ96FC7 376 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 AQP10Q96PS8 301 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 PAXXQ9BUH6 204 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
PRKDC-206ENST00000536429 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 PPP1R14DQ9NXH3 145 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 DKK2Q9UBU2 259 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 YTHDF2Q9Y5A9 579 aaKnown RBP9.4□□□□□ -0.9
PRKDC-206ENST00000536429 TIMM9Q9Y5J7 89 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.9
PRKDC-206ENST00000536429 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 IGLL5B9A064 214 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 G3V3Q6 166 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 J3KRW8 73 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 NBEAP1P0C6P0 100 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 CDKN1BP46527 198 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 PDE6HQ13956 83 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 FRAS1Q86XX4 4008 aa9.39□□□□□ -0.91
PRKDC-206ENST00000536429 TRAV10A0A0B4J240 114 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 C11orf94C9JXX5 98 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 OR7C2O60412 319 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 RAB2AP61019 212 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 ICAM4Q14773 271 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 GFI1BQ5VTD9 330 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
PRKDC-206ENST00000536429 LINC01587Q99440 93 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
PRKDC-206ENST00000536429 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
PRKDC-206ENST00000536429 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
PRKDC-206ENST00000536429 DEFB131BA0A096LNP1 70 aa9.37□□□□□ -0.91
PRKDC-206ENST00000536429 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
PRKDC-206ENST00000536429 FAM122CQ6P4D5 195 aa9.37□□□□□ -0.91
PRKDC-206ENST00000536429 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
PRKDC-206ENST00000536429 OR2T35Q8NGX2 323 aa9.37□□□□□ -0.91
PRKDC-206ENST00000536429 IGHV4-4A0A075B6R2 117 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 SMLR1H3BR10 107 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 HTN1P15515 57 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
PRKDC-206ENST00000536429 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 VGLL1Q99990 258 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 NIPSNAP3BQ9BS92 247 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 TNFSF18Q9UNG2 199 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 PRELID1Q9Y255 219 aa9.36□□□□□ -0.91
PRKDC-206ENST00000536429 HMGB3O15347 200 aaKnown RBP9.35□□□□□ -0.91
PRKDC-206ENST00000536429 M6PRP20645 277 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 ATP6V0CP27449 155 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 TAS2R60P59551 318 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 RANP62826 216 aaKnown RBP9.35□□□□□ -0.91
PRKDC-206ENST00000536429 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
PRKDC-206ENST00000536429 KHDC3LQ587J8 217 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 ODF3Q96PU9 254 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
PRKDC-206ENST00000536429 TRAV12-3A0A0B4J271 114 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 TSPOP30536 169 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 LEPP41159 167 aa9.34□□□□□ -0.91
PRKDC-206ENST00000536429 ZNF266Q14584 549 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms