RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 OR11H4Q8NGC9 324 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 C11orf68Q9H3H3 251 aaKnown RBP11.1□□□□□ -0.63
SDC3-203ENST00000471567 AAMDCQ9H7C9 122 aa11.1□□□□□ -0.63
SDC3-203ENST00000471567 A0A0D9SG52 128 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 UBE2L3P68036 154 aaKnown RBP11.09□□□□□ -0.63
SDC3-203ENST00000471567 FAM122CQ6P4D5 195 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 ZNF705AQ6ZN79 300 aaPredicted RBP11.09□□□□□ -0.63
SDC3-203ENST00000471567 LYPD1Q8N2G4 141 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 ST6GAL2Q96JF0 529 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 NEU1Q99519 415 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 ARPC5LQ9BPX5 153 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 CYTL1Q9NRR1 136 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 PPP1R14DQ9NXH3 145 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 X6R8D5 127 aa11.09□□□□□ -0.63
SDC3-203ENST00000471567 hCG_2014768A0A024R1R8 64 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 SMIM9A6NGZ8 99 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 PRAC2D3DTV9 90 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 BOLA2-SMG1P6H3BVE0 249 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 CDC34P49427 236 aaPredicted RBP11.08□□□□□ -0.64
SDC3-203ENST00000471567 TCTE3Q8IZS6 198 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 RPP25LQ8N5L8 163 aaKnown RBP11.08□□□□□ -0.64
SDC3-203ENST00000471567 Q8NAQ8 132 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 IGF2BP2-AS1Q96M15 143 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 GOLT1BQ9Y3E0 138 aa11.08□□□□□ -0.64
SDC3-203ENST00000471567 A0A1B0GVG6 124 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 M0R3E3 92 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 ICAM4Q14773 271 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 PHYHIPLQ96FC7 376 aa11.07□□□□□ -0.64
SDC3-203ENST00000471567 ACTR3CQ9C0K3 210 aaPredicted RBP11.07□□□□□ -0.64
SDC3-203ENST00000471567 IGHV4-28A0A0C4DH34 117 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 NPIPB6E9PJ23 425 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 M0R2Z0 102 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 CRXO43186 299 aaPredicted RBP11.06□□□□□ -0.64
SDC3-203ENST00000471567 INSP01308 110 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 CASC10Q5T4H9 136 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
SDC3-203ENST00000471567 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
SDC3-203ENST00000471567 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
SDC3-203ENST00000471567 TSPOP30536 169 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 CDKN1BP46527 198 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
SDC3-203ENST00000471567 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
SDC3-203ENST00000471567 C1orf158Q8N1D5 194 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 Q9H3A6 140 aa11.05□□□□□ -0.64
SDC3-203ENST00000471567 BCL2L11O43521 198 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 PFDN1O60925 122 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 EIF3GO75821 320 aaKnown RBP eCLIP11.04□□□□□ -0.64
SDC3-203ENST00000471567 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 CSN1S1P47710 185 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 EIF5AP63241 154 aaKnown RBP11.04□□□□□ -0.64
SDC3-203ENST00000471567 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 OTORQ9NRC9 128 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 DNAH7Q8WXX0 4024 aa11.04□□□□□ -0.64
SDC3-203ENST00000471567 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 DEFB4AO15263 64 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 HMGB3O15347 200 aaKnown RBP11.03□□□□□ -0.64
SDC3-203ENST00000471567 CXorf1O96002 111 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 LEPP41159 167 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 FAM74A1Q5RGS3 127 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 TMUB2Q71RG4 321 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 AKAP14Q86UN6 197 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 TMEM256Q8N2U0 113 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 C11orf45Q8TAV5 145 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 SUN5Q8TC36 379 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 TMEM208Q9BTX3 173 aa11.03□□□□□ -0.64
SDC3-203ENST00000471567 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 RBAKDNA6NC62 111 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 HBE1P02100 147 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 C1QBP02746 253 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 GCHFRP30047 84 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 ERCC8Q13216 396 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
SDC3-203ENST00000471567 AGPAT4-IT1Q9H0P7 198 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 TMEM167BQ9NRX6 74 aa11.02□□□□□ -0.65
SDC3-203ENST00000471567 PGPA6NDG6 321 aa11.01□□□□□ -0.65
SDC3-203ENST00000471567 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
SDC3-203ENST00000471567 RRN3P1Q2M238 152 aa11.01□□□□□ -0.65
SDC3-203ENST00000471567 TMEM78Q5T7P6 136 aa11.01□□□□□ -0.65
SDC3-203ENST00000471567 HYLS1Q96M11 299 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms