RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 TMEM14EPQ6UXP3 125 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 CASC2Q6XLA1 102 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 FOXI2Q6ZQN5 318 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 PRR15Q8IV56 129 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 ISOC1Q96CN7 298 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 DGCR14Q96DF8 476 aaKnown RBP0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 OR4C12Q96R67 309 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 GPX7Q96SL4 187 aaPredicted RBP0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 CCL19Q99731 98 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 PAIP2Q9BPZ3 127 aaKnown RBP0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 OBSL1O75147 1896 aa0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 ZNF106Q9H2Y7 1883 aaKnown RBP0.16□□□□□ -2.38
TIMM9P3-201ENST00000428659 ERBINQ96RT1 1412 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 ADGRL3Q9HAR2 1447 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 C9orf170A2RU37 121 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 ARL5CA6NH57 179 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 BBIP1A8MTZ0 92 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 B4DSR2 109 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 IGHV3-30P01768 117 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 TRACP01848 142 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 MT-ND6P03923 174 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 GYPBP06028 91 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 IGHV3-30-5P0DP03 117 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 FABP4P15090 132 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 RPL37AP61513 92 aaKnown RBP0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 MRPS15P82914 257 aaKnown RBP0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 SNCBQ16143 134 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 CCSMST1Q4G0I0 132 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 HACD4Q5VWC8 232 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 C3orf62Q6ZUJ4 267 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 PHF5AQ7RTV0 110 aaKnown RBP0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 PLAC4Q8WY50 150 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 NAT8BQ9UHF3 227 aa0.15□□□□□ -2.39
TIMM9P3-201ENST00000428659 BCL9O00512 1426 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 KIAA1107Q9UPP5 1409 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 MYH10P35580 1976 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 SCN10AQ9Y5Y9 1956 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 KPNA4O00629 521 aaPredicted RBP0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 TPT1P13693 172 aaKnown RBP0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 RPS3P23396 243 aaKnown RBP eCLIP0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 INSL3P51460 131 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 DNAJB13P59910 316 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 NEDD8Q15843 81 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 XAF1Q6GPH4 301 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 STX19Q8N4C7 294 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 AP3S1Q92572 193 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 CIB3Q96Q77 187 aaPredicted RBP0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 GINS3Q9BRX5 216 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 FAM103A1Q9BTL3 118 aaKnown RBP0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 LAMTOR2Q9Y2Q5 125 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 RTL9Q8NET4 1388 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 PLXND1Q9Y4D7 1925 aa0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 MYO18AQ92614 2054 aaKnown RBP0.14□□□□□ -2.39
TIMM9P3-201ENST00000428659 NISCHQ9Y2I1 1504 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 ALPK3Q96L96 1907 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 FREM3P0C091 2139 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 C3orf85A0A1B0GTC6 90 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 K7ERJ3 54 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 SAA1P0DJI8 122 aaPredicted RBP0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 EVI2AP22794 236 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 CAPZBP47756 277 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 SRP9P49458 86 aaKnown RBP0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 SNRPD3P62318 126 aaKnown RBP0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 BASP1P80723 227 aaKnown RBP0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 MSMO1Q15800 293 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 TMEM229BQ8NBD8 167 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 PLEKHB2Q96CS7 222 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 BIN3Q9NQY0 253 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 C19orf12Q9NSK7 152 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 MED11Q9P086 117 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 NUBP2Q9Y5Y2 271 aa0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 YTHDC2Q9H6S0 1430 aaKnown RBP0.13□□□□□ -2.39
TIMM9P3-201ENST00000428659 MUC4Q99102 2169 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 SCN8AQ9UQD0 1980 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 PCF11O94913 1555 aaKnown RBP0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 LOC107986453A0A1B0GWG9 222 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 A0A1W2PPB8 328 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 A0A1W2PRS3 328 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 KIR3DP1A8MWS1 328 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 MCRIP1C9JLW8 97 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 PGRMC1O00264 195 aaKnown RBP0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 FAM107AO95990 144 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 FABP2P12104 132 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 IZUMO2Q6UXV1 221 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 LINC00269Q8N2A0 174 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 FAM24BQ8N5W8 94 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 TCTEX1D1Q8N7M0 179 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 OR5H6Q8NGV6 325 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 PPP1R1CQ8WVI7 109 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 DYDC1Q8WWB3 177 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 BORCS8Q96FH0 119 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 IL20Q9NYY1 176 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 NAV3Q8IVL0 2385 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 APCP25054 2843 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 CD109Q6YHK3 1445 aa0.12□□□□□ -2.39
TIMM9P3-201ENST00000428659 HEATR1Q9H583 2144 aaKnown RBP0.11□□□□□ -2.39
TIMM9P3-201ENST00000428659 SIP14410 1827 aa0.11□□□□□ -2.39
TIMM9P3-201ENST00000428659 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.11□□□□□ -2.39
TIMM9P3-201ENST00000428659 IFITM5A6NNB3 132 aa0.11□□□□□ -2.39
TIMM9P3-201ENST00000428659 HIGD1CA8MV81 97 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms