RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 DNAH10Q8IVF4 4471 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 M0R3E3 92 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 NDUFB4O95168 129 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 LINC00476Q8WZB0 136 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 TMEM14CQ9P0S9 112 aa10.66□□□□□ -0.7
RTN4-210ENST00000427710 TRBV19A0A075B6N1 114 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 LOC102723971A0A1B0GUV8 181 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 J3KRW8 73 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 INSP01308 110 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 IFNA5P01569 189 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 HBE1P02100 147 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 HIST1H1EP10412 219 aaKnown RBP10.65□□□□□ -0.7
RTN4-210ENST00000427710 EXOC3-AS1Q8N2X6 119 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 TIMM9Q9Y5J7 89 aa10.65□□□□□ -0.7
RTN4-210ENST00000427710 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 IGLL5B9A064 214 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 AMBPP02760 352 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 OR10J4P0C629 311 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 ERCC8Q13216 396 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 GUK1Q16774 197 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 RGS21Q2M5E4 152 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
RTN4-210ENST00000427710 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 FUT9Q9Y231 359 aa10.64□□□□□ -0.71
RTN4-210ENST00000427710 TRAV10A0A0B4J240 114 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 AZU1P20160 251 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 FAM222AQ5U5X8 452 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 LINC01587Q99440 93 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 PAXXQ9BUH6 204 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 OR51M1Q9H341 326 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 KCNIP2Q9NS61 270 aa10.63□□□□□ -0.71
RTN4-210ENST00000427710 YTHDF2Q9Y5A9 579 aaKnown RBP10.63□□□□□ -0.71
RTN4-210ENST00000427710 SPART-AS1P0CW21 52 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 CT45A10P0DMU9 189 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 HTN1P15515 57 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 CDKN1BP46527 198 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 ICAM4Q14773 271 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 FXYD5Q96DB9 178 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 ZNF503Q96F45 646 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 PHYHIPLQ96FC7 376 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 MRPL32Q9BYC8 188 aaKnown RBP10.62□□□□□ -0.71
RTN4-210ENST00000427710 DKK2Q9UBU2 259 aa10.62□□□□□ -0.71
RTN4-210ENST00000427710 DEFB131BA0A096LNP1 70 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 TMEM189A5PLL7 270 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 C11orf94C9JXX5 98 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 OR7C2O60412 319 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 ZNF253O75346 499 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 GIPP09681 153 aaPredicted RBP10.61□□□□□ -0.71
RTN4-210ENST00000427710 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 RAB2AP61019 212 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 FAM122CQ6P4D5 195 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 RNF141Q8WVD5 230 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
RTN4-210ENST00000427710 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
RTN4-210ENST00000427710 NPIPB6E9PJ23 425 aa10.6□□□□□ -0.71
RTN4-210ENST00000427710 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
RTN4-210ENST00000427710 OXA1LQ15070 435 aa10.6□□□□□ -0.71
RTN4-210ENST00000427710 GFI1BQ5VTD9 330 aa10.6□□□□□ -0.71
RTN4-210ENST00000427710 HSD17B11Q8NBQ5 300 aa10.6□□□□□ -0.71
RTN4-210ENST00000427710 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
RTN4-210ENST00000427710 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 FXYD6-FXYD2A0A087WZ82 144 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 HMGB3O15347 200 aaKnown RBP10.59□□□□□ -0.71
RTN4-210ENST00000427710 HTN3P15516 51 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 PDE6HQ13956 83 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
RTN4-210ENST00000427710 AQP10Q96PS8 301 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
RTN4-210ENST00000427710 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 SMLR1H3BR10 107 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 TSPOP30536 169 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 LEPP41159 167 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 RANP62826 216 aaKnown RBP10.58□□□□□ -0.72
RTN4-210ENST00000427710 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
RTN4-210ENST00000427710 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
RTN4-210ENST00000427710 VGLL1Q99990 258 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 EPPK1P58107 5090 aaKnown RBP10.58□□□□□ -0.72
RTN4-210ENST00000427710 FRAS1Q86XX4 4008 aa10.58□□□□□ -0.72
RTN4-210ENST00000427710 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 RNF222A6NCQ9 220 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 G3V3Q6 166 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 DAD1P61803 113 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 KHDC3LQ587J8 217 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 TMEM256Q8N2U0 113 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 OR2T35Q8NGX2 323 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 Q9H3A6 140 aa10.57□□□□□ -0.72
RTN4-210ENST00000427710 M6PRP20645 277 aa10.56□□□□□ -0.72
RTN4-210ENST00000427710 ATP6V0CP27449 155 aa10.56□□□□□ -0.72
RTN4-210ENST00000427710 TAS2R60P59551 318 aa10.56□□□□□ -0.72
RTN4-210ENST00000427710 BTN1A1Q13410 526 aa10.56□□□□□ -0.72
RTN4-210ENST00000427710 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms