RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 NKAPP1Q8N9T2 125 aa5.09□□□□□ -1.59
VCAN-203ENST00000343200 CD55P08174 381 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 C12orf74Q32Q52 190 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 ZNF497Q6ZNH5 498 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 R3HDMLQ9H3Y0 253 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 PSG8Q9UQ74 426 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 SAA2-SAA4A0A096LPE2 208 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 SAA2P0DJI9 122 aaPredicted RBP5.09□□□□□ -1.6
VCAN-203ENST00000343200 SLC25A16P16260 332 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 CFPP27918 469 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 FAM166AQ6J272 317 aa5.09□□□□□ -1.6
VCAN-203ENST00000343200 IGLL1P15814 213 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 AMTNQ6UX39 209 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 IMMP1LQ96LU5 166 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 ANXA2RQ3ZCQ2 193 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 CENPVL1A0A0U1RR11 272 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 CENPVL3A0A0U1RRI6 287 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 Q71RC1 249 aaPredicted RBP5.08□□□□□ -1.6
VCAN-203ENST00000343200 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 TRGV4A0A0C4DH28 118 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 M0R1W7 72 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 OVOL1O14753 267 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 PSG4Q00888 419 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 WFDC1Q9HC57 220 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 FANCD2OSQ96PS1 177 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 IGHV3-72A0A0B4J1Y9 119 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 IGHV5-51A0A0C4DH38 117 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 BAALC-AS2P0C853 105 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 PDLIM4P50479 330 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 CR1LQ2VPA4 569 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 TRAV25A0A0B4J276 109 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 CTSBP07858 339 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 CFHR4Q92496 578 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 ICOSQ9Y6W8 199 aa5.08□□□□□ -1.6
VCAN-203ENST00000343200 RNF152Q8N8N0 203 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 PNRC2Q9NPJ4 139 aaKnown RBP5.07□□□□□ -1.6
VCAN-203ENST00000343200 C17orf98A8MV24 154 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 I3L3M4 83 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 CCL8P80075 99 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 TREML4Q6UXN2 200 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 Q6ZVH6 145 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 EXOC3-AS1Q8N2X6 119 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 KLK10O43240 276 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 LEAP2Q969E1 77 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 IGHV3-66A0A0C4DH42 116 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 C16orf97H3BN30 126 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 HAX1O00165 279 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 CTGFP29279 349 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 PPIFP30405 207 aaKnown RBP5.07□□□□□ -1.6
VCAN-203ENST00000343200 ZFP2Q6ZN57 461 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 TP53TG1Q9Y2A0 90 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 A0A087WX48 190 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 A0A0G2JK05 382 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 FAM90A27PA6NNH2 459 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 GLI3P10071 1580 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 NHSL1Q5SYE7 1610 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 TRAV12-2A0A075B6T6 113 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 DUSP14O95147 198 aaKnown RBP5.07□□□□□ -1.6
VCAN-203ENST00000343200 PRCDQ00LT1 54 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 IGLV1-36A0A0B4J1U3 117 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 TINCRA0A1B0GVN0 87 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 IL17RELQ6ZVW7 336 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 C1orf159Q96HA4 380 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 COX14Q96I36 57 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 FBLN5Q9UBX5 448 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 SPTY2D1-AS1A0A0U1RR47 76 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 C22orf46C9J442 243 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 SH2D1AO60880 128 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 COX6A1P12074 109 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 HMGA1P17096 107 aaKnown RBP5.07□□□□□ -1.6
VCAN-203ENST00000343200 ZIC1Q15915 447 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 NRN1LQ496H8 165 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 TRPT1Q86TN4 253 aaKnown RBP5.07□□□□□ -1.6
VCAN-203ENST00000343200 BADQ92934 168 aa5.07□□□□□ -1.6
VCAN-203ENST00000343200 C21orf140B9A014 251 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 FXYD7P58549 80 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 ZNF474Q6S9Z5 364 aaPredicted RBP5.06□□□□□ -1.6
VCAN-203ENST00000343200 RPP25LQ8N5L8 163 aaKnown RBP5.06□□□□□ -1.6
VCAN-203ENST00000343200 KLF14Q8TD94 323 aaPredicted RBP5.06□□□□□ -1.6
VCAN-203ENST00000343200 DKK2Q9UBU2 259 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 TRAV3A0A0B4J244 114 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 A0A1B0GUS0 222 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 A4D1N5 150 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 SRRM4A7MD48 611 aaKnown RBP5.06□□□□□ -1.6
VCAN-203ENST00000343200 SPINK2P20155 84 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 ZNF138P52744 262 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 CCL7P80098 99 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 STHQ8IWL8 128 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 ZNF784Q8NCA9 323 aaPredicted RBP5.06□□□□□ -1.6
VCAN-203ENST00000343200 PRSS46E5RG02 174 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 PIN1P1O15428 100 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 HERVK_113P63121 156 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 SLC25A29Q8N8R3 303 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 SLX1AQ9BQ83 275 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 KLF2Q9Y5W3 355 aaPredicted RBP5.06□□□□□ -1.6
VCAN-203ENST00000343200 IGHV3-49A0A0A0MS15 119 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 IGLC7A0M8Q6 106 aa5.06□□□□□ -1.6
VCAN-203ENST00000343200 NBR2O15453 112 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms