RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 ZNF114Q8NC26 417 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 IGHV3-64A0A075B6Q5 118 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 LOXP28300 417 aaPredicted RBP10.68□□□□□ -0.7
TRAK1-201ENST00000327628 TP53TG1Q9Y2A0 90 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 PTPRZ1P23471 2315 aaPredicted RBP10.68□□□□□ -0.7
TRAK1-201ENST00000327628 THSD7BQ9C0I4 1608 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 DLEU1O43261 78 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 UBE2V1Q13404 147 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 DNAJC13O75165 2243 aa10.68□□□□□ -0.7
TRAK1-201ENST00000327628 HIST1H4AP62805 103 aaKnown RBP10.67□□□□□ -0.7
TRAK1-201ENST00000327628 CKAP5Q14008 2032 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 C17orf58Q2M2W7 97 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 DOCK6Q96HP0 2047 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 CEP290O15078 2479 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 PRR25Q96S07 402 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 MESP1Q9BRJ9 268 aa10.67□□□□□ -0.7
TRAK1-201ENST00000327628 RNF223E7ERA6 249 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 PAX9P55771 341 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 C11orf44Q8N8P7 122 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 UBL5Q9BZL1 73 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 SBF1O95248 1867 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 IGHV3-53P01767 116 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 IGKV1-16P04430 117 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 PRB3Q04118 309 aaPredicted RBP10.66□□□□□ -0.7
TRAK1-201ENST00000327628 FHL1Q13642 323 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 ZMAT4Q9H898 229 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 HLA-DRB4P13762 266 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 TSSC4Q9Y5U2 329 aaPredicted RBP10.66□□□□□ -0.7
TRAK1-201ENST00000327628 HLA-DRB4X5D2U9 266 aa10.66□□□□□ -0.7
TRAK1-201ENST00000327628 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
TRAK1-201ENST00000327628 F5H768 121 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 VWC2Q2TAL6 325 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 CR1LQ2VPA4 569 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 ZNF493Q6ZR52 646 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 A8MWP6 167 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 HERV-K104P63124 156 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 KLF2Q9Y5W3 355 aaPredicted RBP10.65□□□□□ -0.7
TRAK1-201ENST00000327628 A0A0G2JRQ6 117 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 IL15RAQ13261 267 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 Q96MF0 132 aa10.65□□□□□ -0.7
TRAK1-201ENST00000327628 A0A087WWL8 130 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 DEFB130BP0DP73 79 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 DEFB130AP0DP74 79 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 TMEM89A2RUT3 159 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 TCTEX1D4Q5JR98 221 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 STPG4Q8N801 248 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 C15orf65H3BRN8 121 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 IGHV2-70P01814 119 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 CABIN1Q9Y6J0 2220 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 PIKFYVEQ9Y2I7 2098 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 A0A0U1RRA0 63 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 Q8NFD4 153 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 C18orf32Q8TCD1 76 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 IGFBPL1Q8WX77 278 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 ALPK2Q86TB3 2170 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 IGKV1-6A0A0C4DH72 117 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 Q6ZRM9 215 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 PIP4P1Q86T03 277 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 SMIM2Q9BVW6 85 aa10.64□□□□□ -0.71
TRAK1-201ENST00000327628 TRAV8-3A0A0A6YYJ7 113 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 IGLV3-1P01715 115 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 WIPF2Q8TF74 440 aaPredicted RBP10.63□□□□□ -0.71
TRAK1-201ENST00000327628 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 GAGE12JA6NER3 117 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 F8W1H4 67 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 FXYD7P58549 80 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 GAGE1Q13065 139 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 GAGE4Q13068 117 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 GAGE5Q13069 117 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 PPDPFLQ8WWR9 84 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
TRAK1-201ENST00000327628 TDRD6O60522 2096 aaKnown RBP10.62□□□□□ -0.71
TRAK1-201ENST00000327628 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
TRAK1-201ENST00000327628 C9orf66Q5T8R8 295 aa10.62□□□□□ -0.71
TRAK1-201ENST00000327628 TRAV8-1A0A0A6YYK1 113 aa10.62□□□□□ -0.71
TRAK1-201ENST00000327628 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
TRAK1-201ENST00000327628 F8VRH5 84 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 LY6G6EA0A0G2JKS1 128 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 RUSC1-AS1Q66K80 236 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 VOPP1Q96AW1 172 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 U3KQA8 63 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 DKK1O94907 266 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 Q6ZR03 302 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 GREB1Q4ZG55 1949 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
TRAK1-201ENST00000327628 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 HEATR5BQ9P2D3 2071 aa10.61□□□□□ -0.71
TRAK1-201ENST00000327628 C9JAW5 83 aa10.6□□□□□ -0.71
TRAK1-201ENST00000327628 SPINK13Q1W4C9 94 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms