RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 H7C1H1 209 aa12.45□□□□□ -0.42
LEMD3-201ENST00000308330 FGFBP3Q8TAT2 258 aa12.45□□□□□ -0.42
LEMD3-201ENST00000308330 NDUFA7O95182 113 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 CLPSP04118 112 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 UTF1Q5T230 341 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 HCP5Q6MZN7 132 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 PCSK4Q6UW60 755 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 LYPD3O95274 346 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 IGHG4P01861 327 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 LINC00479Q96M42 142 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 LIME1Q9H400 295 aa12.44□□□□□ -0.42
LEMD3-201ENST00000308330 IQCF6A8MYZ5 107 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 IGHG3P01860 377 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 IFI27P40305 119 aaPredicted RBP12.43□□□□□ -0.42
LEMD3-201ENST00000308330 PLCE1Q9P212 2302 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 NRGNQ92686 78 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 KIR2DL4Q99706 377 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 SPTBN4Q9H254 2564 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 CT83Q5H943 113 aa12.43□□□□□ -0.42
LEMD3-201ENST00000308330 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 DPM3Q9P2X0 92 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 U3KQE9 123 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 C3orf22Q8N5N4 141 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 THBDP07204 575 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 ATP5G1P05496 136 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 FAM19A5Q7Z5A7 132 aaPredicted RBP12.42□□□□□ -0.42
LEMD3-201ENST00000308330 ABCA2Q9BZC7 2435 aa12.42□□□□□ -0.42
LEMD3-201ENST00000308330 TRAV40A0A0B4J280 105 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 YLPM1P49750 1951 aaKnown RBP12.41□□□□□ -0.42
LEMD3-201ENST00000308330 NAV2Q8IVL1 2488 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 XGP55808 180 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 DCTN5Q9BTE1 182 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 ACYP1P07311 99 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 CD7P09564 240 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 FGF6P10767 208 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 RETNQ9HD89 108 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 MALRD1Q5VYJ5 2156 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 TMEM14EPQ6UXP3 125 aa12.41□□□□□ -0.42
LEMD3-201ENST00000308330 PTPRDP23468 1912 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 A0A1B0GX51 115 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 LINC01545Q5VT33 79 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 CYYR1Q96J86 154 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 PRO1854Q9UHT4 67 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 ZNF747Q9BV97 191 aa12.4□□□□□ -0.42
LEMD3-201ENST00000308330 HTN1P15515 57 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 SLC25A15Q9Y619 301 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 C12orf77C9JDV5 145 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 LINC00527Q9UJ94 153 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 TINCRA0A1B0GVN0 87 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 IGFL3Q6UXB1 125 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 LINC00305Q7Z4B0 112 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 NLRC5Q86WI3 1866 aa12.39□□□□□ -0.43
LEMD3-201ENST00000308330 TRBV25-1A0A075B6N4 114 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 B3GALT5-AS1P59052 145 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 J3QKU1 62 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 CCL3L1P16619 93 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
LEMD3-201ENST00000308330 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 ZNF672Q499Z4 452 aaPredicted RBP12.38□□□□□ -0.43
LEMD3-201ENST00000308330 NCR2O95944 276 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 CFPP27918 469 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 ZNF146Q15072 292 aa12.38□□□□□ -0.43
LEMD3-201ENST00000308330 LINC00173Q6ZV60 143 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 HIVEP2P31629 2446 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 RHODO00212 210 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 GTSF1Q8WW33 167 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 IGHV1-46P01743 117 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 HIGD1BQ9P298 99 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 PYYP10082 97 aa12.37□□□□□ -0.43
LEMD3-201ENST00000308330 SP5Q6BEB4 398 aaPredicted RBP12.37□□□□□ -0.43
LEMD3-201ENST00000308330 EFNA4P52798 201 aa12.36□□□□□ -0.43
LEMD3-201ENST00000308330 WT1P19544 449 aaPredicted RBP12.36□□□□□ -0.43
LEMD3-201ENST00000308330 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
LEMD3-201ENST00000308330 TREML4Q6UXN2 200 aa12.36□□□□□ -0.43
LEMD3-201ENST00000308330 C20orf204Q6ZNR8 217 aa12.36□□□□□ -0.43
LEMD3-201ENST00000308330 GATA3P23771 443 aa12.36□□□□□ -0.43
LEMD3-201ENST00000308330 PEMTQ9UBM1 199 aa12.36□□□□□ -0.43
LEMD3-201ENST00000308330 RPL39P5Q59GN2 51 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 SLC25A39Q9BZJ4 359 aaPredicted RBP12.35□□□□□ -0.43
LEMD3-201ENST00000308330 IGHV3-35A0A0C4DH35 117 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 CD24P25063 80 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 ORMDL2Q53FV1 153 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms