RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 RASL11AQ6T310 242 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 IGLV3-9A0A075B6K5 115 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 KIR2DL5BA0A0G2JN68 375 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 KIR2DL5BA0A0G2JPC4 375 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 CD5LO43866 347 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 ZNF56Q15929 161 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM249Q2WGJ8 235 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM219Q86XT9 240 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 KIR2DL5AQ8N109 375 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 C17orf77Q96MU5 243 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 IGLC7A0M8Q6 106 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 FAM231BA6NCW3 169 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM158Q8WZ71 300 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 GDF5OSQ5U4N7 250 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 CLEC2AQ6UVW9 174 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 NCOR1P1Q9H4R4 102 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 RAI1Q7Z5J4 1906 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-201ENST00000249837 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-201ENST00000249837 HLA-DMBP28068 263 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 PSG3Q16557 428 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 C22orf46C9J442 243 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 SAMD5Q5TGI4 173 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 C8orf49Q96NF6 230 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 VGLL1Q99990 258 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 CCL25O15444 150 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 RPL13AP40429 203 aaKnown RBP3.69□□□□□ -1.82
VPS13C-201ENST00000249837 RAB9AP51151 201 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 NDPQ00604 133 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 PATE2Q6UY27 113 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 RNF182Q8N6D2 247 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 OR9G4Q8NGQ1 327 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM238LA0A1B0GVL6 79 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 A6NJY4 79 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 RAXQ9Y2V3 346 aa3.69□□□□□ -1.82
VPS13C-201ENST00000249837 LCNL1Q6ZST4 164 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 TMEM75Q8N9X5 138 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 NEU4Q8WWR8 484 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 SPRY2O43597 315 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 FAM215AQ9Y5M1 114 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 K7EM74 188 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 IGLC1P0CG04 106 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 MRPL36Q9P0J6 103 aaKnown RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 P0C879 139 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 GATA4P43694 442 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 FAM106AQ4KMX7 169 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 THAP8Q8NA92 274 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 ZC2HC1AQ96GY0 325 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 LGALS3P17931 250 aaKnown RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 ID1P41134 155 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 SMAGPQ0VAQ4 97 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 SYT8Q8NBV8 401 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 ASIPP42127 132 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 TNFRSF14Q92956 283 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 NXT2Q9NPJ8 142 aaKnown RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 FAM159AQ6UWV7 190 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 FAM231DQ6ZW35 169 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 MRPL52Q86TS9 123 aaKnown RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 DDB2Q92466 427 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 SMAD7O15105 426 aaKnown RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 PROP1O75360 226 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 THBDP07204 575 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 ATP5J2P56134 94 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 DAZAP2Q15038 168 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 SMIM27A0A1W2PRY6 76 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 ADAMTSL5Q6ZMM2 481 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 MTURNQ8N3F0 131 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 IGHV1-24A0A0C4DH33 117 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 SFTPCP11686 197 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 TP53TG3Q9ULZ0 132 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 PPBPP02775 128 aa3.68□□□□□ -1.82
VPS13C-201ENST00000249837 KLF5Q13887 457 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-201ENST00000249837 HAX1O00165 279 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 PIMREGQ9BSJ6 248 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 IGKCP01834 107 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 ZC2HC1BQ5TFG8 222 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 ANKRD17O75179 2603 aaKnown RBP3.67□□□□□ -1.82
VPS13C-201ENST00000249837 K7ERJ3 54 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 CRXO43186 299 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-201ENST00000249837 LAGE3Q14657 143 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 CT83Q5H943 113 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 ZNF503Q96F45 646 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 DYNLRB2Q8TF09 96 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 FAM120AOSQ5T036 256 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 BVES-AS1Q5T3Y7 98 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 SAMD13Q5VXD3 122 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 TP73-AS1Q9UF72 201 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 FASNP49327 2511 aaKnown RBP3.67□□□□□ -1.82
VPS13C-201ENST00000249837 GATA1P15976 413 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-201ENST00000249837 C1orf229Q6ZS94 237 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-201ENST00000249837 NUP37Q8NFH4 326 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 G3V318 75 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 EMP1P54849 157 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 DKK2Q9UBU2 259 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 TRBV19A0A075B6N1 114 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 IL17RELQ6ZVW7 336 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 PIP4P1Q86T03 277 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 IGHV3OR16-12A0A075B7B8 117 aa3.67□□□□□ -1.82
VPS13C-201ENST00000249837 IGKV1OR2-108A0A075B7D4 117 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms