RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 CXorf51AA0A1B0GTR3 108 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 H0YGG7 62 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 J3QQQ9 107 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 ZNF441Q8N8Z8 693 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 WDR31Q8NA23 367 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 HEATR1Q9H583 2144 aaKnown RBP4.89□□□□□ -1.63
CHD2-221ENST00000635856 XIRP2A4UGR9 3374 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 IGKV1D-43A0A0B4J1Z2 117 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 TRAV41A0A0B4J266 112 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 LINC01620Q4KN68 170 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 C10orf113Q5VZT2 155 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 RSPO2Q6UXX9 243 aaPredicted RBP4.89□□□□□ -1.63
CHD2-221ENST00000635856 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 ODF3Q96PU9 254 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 VKORC1Q9BQB6 163 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 FREM3P0C091 2139 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 TRBV10-2A0A0K0K1G8 114 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 TEX49A0A1B0GTD5 131 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 PMS2P5A8MQ11 134 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 LINC01619G3V211 115 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 M0R3E3 92 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 C9orf85Q96MD7 179 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 ABCA7Q8IZY2 2146 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 TRAV17A0A0B4J275 112 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 NBR2O15453 112 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 UBE2D3P61077 147 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 FGF12P61328 243 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 UBE2D2P62837 147 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 LINC00596Q86U02 117 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 TMEM86BQ8N661 226 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 AGPAT4-IT1Q9H0P7 198 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 DKK4Q9UBT3 224 aa4.89□□□□□ -1.63
CHD2-221ENST00000635856 DLX1P56177 255 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 CCL8P80075 99 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 IL17RELQ6ZVW7 336 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 RPS19BP1Q86WX3 136 aaKnown RBP4.88□□□□□ -1.63
CHD2-221ENST00000635856 SBSPONQ8IVN8 264 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 LYZL4Q96KX0 146 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 SSUH2Q9Y2M2 353 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 F5P12259 2224 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 PLXNA2O75051 1894 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 KNCNA6PVL3 124 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 MS4A18H0YCH9 400 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 PLEKHB2Q96CS7 222 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 PEMTQ9UBM1 199 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD2-221ENST00000635856 TCF15Q12870 199 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 ASPHD1Q5U4P2 390 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 MRPL55Q7Z7F7 128 aaKnown RBP4.88□□□□□ -1.63
CHD2-221ENST00000635856 UBALD1Q8TB05 177 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 MYO16Q9Y6X6 1858 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 HCFC1P51610 2035 aa4.88□□□□□ -1.63
CHD2-221ENST00000635856 TRBV7-3A0A075B6L6 115 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.87□□□□□ -1.63
CHD2-221ENST00000635856 PRNTQ86SH4 94 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 NDUFA11Q86Y39 141 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 EXOC3-AS1Q8N2X6 119 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 SHANK1Q9Y566 2161 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 CUL9Q8IWT3 2517 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 A0A1W2PP55 124 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 MNX1P50219 401 aaPredicted RBP4.87□□□□□ -1.63
CHD2-221ENST00000635856 SSR4P51571 173 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 RSPO1Q2MKA7 263 aaPredicted RBP4.87□□□□□ -1.63
CHD2-221ENST00000635856 LINC00336Q6ZUF6 198 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 PLA2G2FQ9BZM2 168 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 MRPL35Q9NZE8 188 aaKnown RBP4.87□□□□□ -1.63
CHD2-221ENST00000635856 A0A1W2PQU0 124 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 TMEM89A2RUT3 159 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 H3BT86 120 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 FCGR3BO75015 233 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 PCDH15Q96QU1 1955 aa4.87□□□□□ -1.63
CHD2-221ENST00000635856 IGKV1-12A0A0C4DH73 117 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 MRPS12O15235 138 aaKnown RBP4.86□□□□□ -1.63
CHD2-221ENST00000635856 IGKV1D-12P01611 117 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 ARMS2P0C7Q2 107 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 CFC1BP0CG36 223 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 CFC1P0CG37 223 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 CXCL5P42830 114 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 ZNF329Q86UD4 541 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 A0A1W2PPC4 97 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 H3BTX0 84 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 K7EM74 188 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 PLAUP00749 431 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 PLGLAQ15195 96 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 PRIMA1Q86XR5 153 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 TNRC18O15417 2968 aaPredicted RBP4.86□□□□□ -1.63
CHD2-221ENST00000635856 PLXNA4Q9HCM2 1894 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 THSD7BQ9C0I4 1608 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 TRAV12-2A0A075B6T6 113 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 C16orf97H3BN30 126 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 MAPKAPK5-AS1Q8N8E1 139 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 S1PR3Q99500 378 aa4.86□□□□□ -1.63
CHD2-221ENST00000635856 NCOA6Q14686 2063 aaPredicted RBP4.86□□□□□ -1.63
CHD2-221ENST00000635856 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms