RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 IFNA5P01569 189 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 MIFP14174 115 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 MORN5Q5VZ52 161 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 OR11H7Q8NGC8 314 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 ASB13Q8WXK3 278 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 SLC50A1Q9BRV3 221 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 HRH4Q9H3N8 390 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 KCNIP2Q9NS61 270 aa12.17□□□□□ -0.46
UBE3D-208ENST00000626828 TENM2Q9NT68 2774 aa12.16□□□□□ -0.46
UBE3D-208ENST00000626828 GUK1Q16774 197 aa12.16□□□□□ -0.46
UBE3D-208ENST00000626828 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
UBE3D-208ENST00000626828 C11orf68Q9H3H3 251 aaKnown RBP12.16□□□□□ -0.46
UBE3D-208ENST00000626828 ZNF331Q9NQX6 463 aaPredicted RBP12.16□□□□□ -0.46
UBE3D-208ENST00000626828 A8MTW9 85 aa12.15□□□□□ -0.46
UBE3D-208ENST00000626828 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
UBE3D-208ENST00000626828 OXA1LQ15070 435 aa12.15□□□□□ -0.46
UBE3D-208ENST00000626828 H3BQ15 152 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
UBE3D-208ENST00000626828 GIPP09681 153 aaPredicted RBP12.14□□□□□ -0.47
UBE3D-208ENST00000626828 FXYD7P58549 80 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 Q8NAQ8 132 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 SAT2Q96F10 170 aaPredicted RBP12.14□□□□□ -0.47
UBE3D-208ENST00000626828 SMIM3Q9BZL3 60 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 SLC35B3Q9H1N7 401 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 X6R8D5 127 aa12.14□□□□□ -0.47
UBE3D-208ENST00000626828 CXorf65A6NEN9 183 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 DEFB4AO15263 64 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 AMBPP02760 352 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
UBE3D-208ENST00000626828 HLA-DMBP28068 263 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
UBE3D-208ENST00000626828 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 OR8A1Q8NGG7 326 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 C11orf45Q8TAV5 145 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 RPUSD4Q96CM3 377 aaKnown RBP12.13□□□□□ -0.47
UBE3D-208ENST00000626828 NEU1Q99519 415 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 PARD6GQ9BYG4 376 aaPredicted RBP12.13□□□□□ -0.47
UBE3D-208ENST00000626828 MFFQ9GZY8 342 aa12.13□□□□□ -0.47
UBE3D-208ENST00000626828 IGHV4-28A0A0C4DH34 117 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 SMIM9A6NGZ8 99 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 ZNF253O75346 499 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 ZNF705DP0CH99 300 aaPredicted RBP12.12□□□□□ -0.47
UBE3D-208ENST00000626828 ZNF705BP0CI00 300 aaPredicted RBP12.12□□□□□ -0.47
UBE3D-208ENST00000626828 RBMY1A1P0DJD3 496 aaKnown RBP12.12□□□□□ -0.47
UBE3D-208ENST00000626828 RBMY1CP0DJD4 496 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 RBMY1FQ15415 496 aaKnown RBP12.12□□□□□ -0.47
UBE3D-208ENST00000626828 AMTNQ6UX39 209 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 ZNF705AQ6ZN79 300 aaPredicted RBP12.12□□□□□ -0.47
UBE3D-208ENST00000626828 PPP1R14DQ9NXH3 145 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
UBE3D-208ENST00000626828 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
UBE3D-208ENST00000626828 H3BTX0 84 aa12.11□□□□□ -0.47
UBE3D-208ENST00000626828 RHOBP62745 196 aa12.11□□□□□ -0.47
UBE3D-208ENST00000626828 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
UBE3D-208ENST00000626828 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
UBE3D-208ENST00000626828 WFDC1Q9HC57 220 aa12.11□□□□□ -0.47
UBE3D-208ENST00000626828 GOLT1BQ9Y3E0 138 aa12.11□□□□□ -0.47
UBE3D-208ENST00000626828 TRBV19A0A075B6N1 114 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 ZNF705FA8MVS1 300 aaPredicted RBP12.1□□□□□ -0.47
UBE3D-208ENST00000626828 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 FFAR4Q5NUL3 377 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
UBE3D-208ENST00000626828 MIR17HGQ75NE6 70 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 AQP10Q96PS8 301 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
UBE3D-208ENST00000626828 KMT2CQ8NEZ4 4911 aaKnown RBP12.09□□□□□ -0.47
UBE3D-208ENST00000626828 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 SLC17A3O00476 420 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 PDE6HQ13956 83 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 Q5BKY6 102 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 INO80EQ8NBZ0 244 aaPredicted RBP12.09□□□□□ -0.47
UBE3D-208ENST00000626828 OR10J6PQ8NGY7 276 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 PHLDA1Q8WV24 401 aaPredicted RBP12.09□□□□□ -0.47
UBE3D-208ENST00000626828 FAM167A-AS1Q96KT0 104 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 SLC25A2Q9BXI2 301 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
UBE3D-208ENST00000626828 KLK5Q9Y337 293 aaPredicted RBP12.09□□□□□ -0.47
UBE3D-208ENST00000626828 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
UBE3D-208ENST00000626828 NBEAP1P0C6P0 100 aa12.08□□□□□ -0.48
UBE3D-208ENST00000626828 PYYP10082 97 aa12.08□□□□□ -0.48
UBE3D-208ENST00000626828 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
UBE3D-208ENST00000626828 ZNF266Q14584 549 aa12.08□□□□□ -0.48
UBE3D-208ENST00000626828 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
UBE3D-208ENST00000626828 NDUFB4O95168 129 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 SPINK13Q1W4C9 94 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
UBE3D-208ENST00000626828 OR2T35Q8NGX2 323 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 RNF141Q8WVD5 230 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 MRPL53Q96EL3 112 aaKnown RBP12.07□□□□□ -0.48
UBE3D-208ENST00000626828 TMEM208Q9BTX3 173 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 PAXXQ9BUH6 204 aa12.07□□□□□ -0.48
UBE3D-208ENST00000626828 RFNGQ9Y644 331 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms