RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 MRPS12O15235 138 aaKnown RBP16.02■□□□□ 0.16
CBWD3-212ENST00000616550 MPDU1O75352 247 aa16.02■□□□□ 0.16
CBWD3-212ENST00000616550 CXCL3P19876 107 aa16.02■□□□□ 0.16
CBWD3-212ENST00000616550 OPCMLQ14982 345 aa16.02■□□□□ 0.16
CBWD3-212ENST00000616550 ZNF705AQ6ZN79 300 aaPredicted RBP16.02■□□□□ 0.16
CBWD3-212ENST00000616550 OR5C1Q8NGR4 320 aa16.02■□□□□ 0.16
CBWD3-212ENST00000616550 PPP1R1CQ8WVI7 109 aa16.02■□□□□ 0.16
CBWD3-212ENST00000616550 RYR3Q15413 4870 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 IGHV3OR16-12A0A075B7B8 117 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 SMIM9A6NGZ8 99 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 H0YIZ8 118 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 CXCL2P19875 107 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 CNN1P51911 297 aaKnown RBP16.01■□□□□ 0.15
CBWD3-212ENST00000616550 PSG3Q16557 428 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 MORN5Q5VZ52 161 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 LCN15Q6UWW0 184 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 NEU1Q99519 415 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 PXMP4Q9Y6I8 212 aa16.01■□□□□ 0.15
CBWD3-212ENST00000616550 A8MTW9 85 aa16■□□□□ 0.15
CBWD3-212ENST00000616550 PET100P0DJ07 73 aa16■□□□□ 0.15
CBWD3-212ENST00000616550 SLC50A1Q9BRV3 221 aa16■□□□□ 0.15
CBWD3-212ENST00000616550 GOLT1BQ9Y3E0 138 aa16■□□□□ 0.15
CBWD3-212ENST00000616550 DYNC2H1Q8NCM8 4307 aaKnown RBP16■□□□□ 0.15
CBWD3-212ENST00000616550 ZNF705FA8MVS1 300 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-212ENST00000616550 SNRPCP09234 159 aaKnown RBP15.99■□□□□ 0.15
CBWD3-212ENST00000616550 ZNF705DP0CH99 300 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-212ENST00000616550 ZNF705BP0CI00 300 aaPredicted RBP15.99■□□□□ 0.15
CBWD3-212ENST00000616550 HLA-DMBP28068 263 aa15.99■□□□□ 0.15
CBWD3-212ENST00000616550 NPCDR1Q9BY65 106 aa15.99■□□□□ 0.15
CBWD3-212ENST00000616550 TRAV5A0A0B4J249 113 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 C11orf94C9JXX5 98 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 MPC2O95563 127 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 AMBPP02760 352 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 CLINT1Q14677 625 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 AMTNQ6UX39 209 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 OR11H7Q8NGC8 314 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 THAP6Q8TBB0 222 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 RNF126Q9BV68 326 aa15.98■□□□□ 0.15
CBWD3-212ENST00000616550 ZNF331Q9NQX6 463 aaPredicted RBP15.98■□□□□ 0.15
CBWD3-212ENST00000616550 HIST1H1AQ02539 215 aaPredicted RBP15.97■□□□□ 0.15
CBWD3-212ENST00000616550 OR8A1Q8NGG7 326 aa15.97■□□□□ 0.15
CBWD3-212ENST00000616550 RPUSD4Q96CM3 377 aaKnown RBP15.97■□□□□ 0.15
CBWD3-212ENST00000616550 PPP1R14DQ9NXH3 145 aa15.97■□□□□ 0.15
CBWD3-212ENST00000616550 TMEM189A5PLL7 270 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 LY6G6CO95867 125 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 PTTG1O95997 202 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 IGLC2P0DOY2 106 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 RHOBP62745 196 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 GUK1Q16774 197 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 SPINK13Q1W4C9 94 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 C2CD4CQ8TF44 421 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 LINC00476Q8WZB0 136 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 IGF2BP2-AS1Q96M15 143 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 RFNGQ9Y644 331 aa15.96■□□□□ 0.15
CBWD3-212ENST00000616550 H3BTX0 84 aa15.95■□□□□ 0.14
CBWD3-212ENST00000616550 HBE1P02100 147 aa15.95■□□□□ 0.14
CBWD3-212ENST00000616550 C1orf158Q8N1D5 194 aa15.95■□□□□ 0.14
CBWD3-212ENST00000616550 TMEM208Q9BTX3 173 aa15.95■□□□□ 0.14
CBWD3-212ENST00000616550 ALG5Q9Y673 324 aa15.95■□□□□ 0.14
CBWD3-212ENST00000616550 H3BQ15 152 aa15.94■□□□□ 0.14
CBWD3-212ENST00000616550 M0R2Z0 102 aa15.94■□□□□ 0.14
CBWD3-212ENST00000616550 EMP1P54849 157 aa15.94■□□□□ 0.14
CBWD3-212ENST00000616550 LYSTQ99698 3801 aa15.94■□□□□ 0.14
CBWD3-212ENST00000616550 KCNIP2Q9NS61 270 aa15.94■□□□□ 0.14
CBWD3-212ENST00000616550 CELA1Q9UNI1 258 aa15.94■□□□□ 0.14
CBWD3-212ENST00000616550 SLC17A3O00476 420 aa15.93■□□□□ 0.14
CBWD3-212ENST00000616550 INSP01308 110 aa15.93■□□□□ 0.14
CBWD3-212ENST00000616550 Q6ZTC4 211 aa15.93■□□□□ 0.14
CBWD3-212ENST00000616550 SAT2Q96F10 170 aaPredicted RBP15.93■□□□□ 0.14
CBWD3-212ENST00000616550 ATP5SQ99766 215 aa15.93■□□□□ 0.14
CBWD3-212ENST00000616550 WDR61Q9GZS3 305 aaKnown RBP15.93■□□□□ 0.14
CBWD3-212ENST00000616550 HSPB11Q9Y547 144 aa15.93■□□□□ 0.14
CBWD3-212ENST00000616550 TRAV10A0A0B4J240 114 aa15.92■□□□□ 0.14
CBWD3-212ENST00000616550 C17orf112F2Z3M2 114 aa15.92■□□□□ 0.14
CBWD3-212ENST00000616550 BOLA2-SMG1P6H3BVE0 249 aa15.92■□□□□ 0.14
CBWD3-212ENST00000616550 SPART-AS1P0CW21 52 aa15.92■□□□□ 0.14
CBWD3-212ENST00000616550 PRB4P10163 310 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-212ENST00000616550 RPL12P30050 165 aaKnown RBP15.92■□□□□ 0.14
CBWD3-212ENST00000616550 RRN3P1Q2M238 152 aa15.92■□□□□ 0.14
CBWD3-212ENST00000616550 MBD2Q9UBB5 411 aa15.92■□□□□ 0.14
CBWD3-212ENST00000616550 IGLL5B9A064 214 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 TCTAP57738 103 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 C12orf74Q32Q52 190 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 GCSAMLQ5JQS6 135 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 ZNF767PQ75MW2 155 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 OR10J6PQ8NGY7 276 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 ZNF586Q9NXT0 402 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 TMEM14CQ9P0S9 112 aa15.91■□□□□ 0.14
CBWD3-212ENST00000616550 CRXO43186 299 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-212ENST00000616550 HIST1H1EP10412 219 aaKnown RBP15.9■□□□□ 0.14
CBWD3-212ENST00000616550 BAP18Q8IXM2 172 aa15.9■□□□□ 0.14
CBWD3-212ENST00000616550 SCGB1C1Q8TD33 95 aa15.9■□□□□ 0.14
CBWD3-212ENST00000616550 TRAV12-2A0A075B6T6 113 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 TEX48A0A1B0GUV7 120 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 LOC102723971A0A1B0GUV8 181 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 ZNF253O75346 499 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 IFNA5P01569 189 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 SMIM3Q9BZL3 60 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 MED28Q9H204 178 aa15.89■□□□□ 0.13
CBWD3-212ENST00000616550 TIMM9Q9Y5J7 89 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms