RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 FBXL19-AS1Q494R0 122 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 COL5A1-AS1Q5SY13 56 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 OR11H6Q8NGC7 330 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 KMT2EQ8IZD2 1858 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 TRBV19A0A075B6N1 114 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 OR4C46A6NHA9 309 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 PATE2Q6UY27 113 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 KLK15Q9H2R5 256 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 SZT2Q5T011 3432 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 IGLV2-23P01705 113 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 FAM159AQ6UWV7 190 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 ST6GALNAC6Q969X2 333 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 NPFFR1Q9GZQ6 430 aa10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
PPP4R3B-206ENST00000616407 SNRPD3P62318 126 aaKnown RBP10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 ADAMTS20P59510 1910 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 CBY3A6NI87 242 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 FAM120AOSQ5T036 256 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 PRDM13Q9H4Q3 707 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 RASL11AQ6T310 242 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 NDUFAF3Q9BU61 184 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 TRBV7-1A0A0A6YYK4 115 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 SLC25A34Q6PIV7 304 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 LYZL1Q6UWQ5 148 aa10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
PPP4R3B-206ENST00000616407 RNF224P0DH78 156 aa10.46□□□□□ -0.73
PPP4R3B-206ENST00000616407 MAPK1IP1LQ8NDC0 245 aa10.46□□□□□ -0.73
PPP4R3B-206ENST00000616407 NUDT3O95989 172 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 FBLN7Q53RD9 439 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 C1orf122Q6ZSJ8 110 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZNF491Q8N8L2 437 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 IGHV1-69DA0A0B4J2H0 117 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 HAX1O00165 279 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 IGHV1-69P01742 117 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 FOSL1P15407 271 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 DSCR9P59020 149 aa10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZMAT5Q9UDW3 170 aaKnown RBP10.46□□□□□ -0.74
PPP4R3B-206ENST00000616407 XIRP2A4UGR9 3374 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 MSMBP08118 114 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 PYGO2Q9BRQ0 406 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 SH2D1AO60880 128 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 NDUFS6O75380 124 aaKnown RBP10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 PDE6HQ13956 83 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 LBHQ53QV2 105 aaPredicted RBP10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 ASIPP42127 132 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 Q8N7P7 452 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 OR4C5Q8NGB2 326 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 HCFC1P51610 2035 aa10.45□□□□□ -0.74
PPP4R3B-206ENST00000616407 HOXB4P17483 251 aaPredicted RBP10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZNF138P52744 262 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 PRSS22Q9GZN4 317 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 FAM167A-AS1Q96KT0 104 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 H3BRN7 92 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 NDUFS8O00217 210 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 FAM231DQ6ZW35 169 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 WFDC12Q8WWY7 111 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 SMIM12Q96EX1 92 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 MIEN1Q9BRT3 115 aa10.44□□□□□ -0.74
PPP4R3B-206ENST00000616407 ARMS2P0C7Q2 107 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 ERCC8Q13216 396 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZNF414Q96IQ9 312 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 TMEM14CQ9P0S9 112 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 K7EIM0 57 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 Q0VG73 95 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 CCDC168Q8NDH2 2452 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 I3L2K1 104 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZFP36P26651 326 aaKnown RBP10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 SLAQ13239 276 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
PPP4R3B-206ENST00000616407 PRSS46E5RG02 174 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 SNAI2O43623 268 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 NCR2O95944 276 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 TSPOP30536 169 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 ITLN2Q8WWU7 325 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 NAV3Q8IVL0 2385 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 TEX22C9J3V5 150 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 C8orf49Q96NF6 230 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 ZNF492Q9P255 531 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 KLF2Q9Y5W3 355 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 SMIM27A0A1W2PRY6 76 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 D6R8Y8 96 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 INS-IGF2F8WCM5 200 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms